Gene Ksed_18970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18970 
Symbol 
ID8373402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1970136 
End bp1970846 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID644992152 
Productpredicted membrane protein 
Protein accessionYP_003149663 
Protein GI256825703 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.129095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCCA TCCGTATGAT CGCCCGCCCG ATGCTCGGCG GCATCTTCGT CGCCACCGGC 
ATGAACCACA TCAAGAACCC CGACTACGGC GCAGAGGTTG CCCAGGGCTT CAACGACCAG
GTTCTGGAGC CCGTGGGTCT GGGCGCCGAC GGCCCCACTC TCATGAAGGT GCACGGCTAC
GTCTCCGTGG TCGCCGGTGC CGGTCTGGCC CTCGGCGTGG CCCCCCGCCT GTGCGCGCTC
GCGCTCGCCG CGGACGTCAC CGCCGTGAAC CTCACCGCCA ACCGCTTCTG GGAGCAGGAG
GGCGAGGAGC GCCAGGGCAC GCAGATCCAG TTCCTGAAGG ACCTGGCCAT CGCCGGTGGT
CTGCTGATCG CCTCGGTGGA CACCAAGGGC AAGCCGGGTC TGGCCTGGCG CGCGCAGCAC
GCTGCCGAGG CCGCCGGCCA CCGCGCCGAC CACCTGGGCA CCATCGCCGG CCTGAAGAAG
GACATCGCGG GCCTGCAGGC CGAGAACAAG GCCCTCAAGG CCAAGGCCGC CGTGAGCGGC
TCCGCGGGCA AGGCCACCGG CAAGGCCGCG GGCGTCACCG GCCTGCTGGG CAGCCAGGCC
AAGGCCGGCA AGAAGGCCTT CGCCGCCAAG AAGCGCAAGG ACTCCTTCAT CGACCGTGCG
CTGGACGCCG TCGAGGACTC CTACAACACT GCCAAGAAGA AGGTCGCCTG A
 
Protein sequence
MDPIRMIARP MLGGIFVATG MNHIKNPDYG AEVAQGFNDQ VLEPVGLGAD GPTLMKVHGY 
VSVVAGAGLA LGVAPRLCAL ALAADVTAVN LTANRFWEQE GEERQGTQIQ FLKDLAIAGG
LLIASVDTKG KPGLAWRAQH AAEAAGHRAD HLGTIAGLKK DIAGLQAENK ALKAKAAVSG
SAGKATGKAA GVTGLLGSQA KAGKKAFAAK KRKDSFIDRA LDAVEDSYNT AKKKVA