Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_18970 |
Symbol | |
ID | 8373402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1970136 |
End bp | 1970846 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644992152 |
Product | predicted membrane protein |
Protein accession | YP_003149663 |
Protein GI | 256825703 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.129095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCCA TCCGTATGAT CGCCCGCCCG ATGCTCGGCG GCATCTTCGT CGCCACCGGC ATGAACCACA TCAAGAACCC CGACTACGGC GCAGAGGTTG CCCAGGGCTT CAACGACCAG GTTCTGGAGC CCGTGGGTCT GGGCGCCGAC GGCCCCACTC TCATGAAGGT GCACGGCTAC GTCTCCGTGG TCGCCGGTGC CGGTCTGGCC CTCGGCGTGG CCCCCCGCCT GTGCGCGCTC GCGCTCGCCG CGGACGTCAC CGCCGTGAAC CTCACCGCCA ACCGCTTCTG GGAGCAGGAG GGCGAGGAGC GCCAGGGCAC GCAGATCCAG TTCCTGAAGG ACCTGGCCAT CGCCGGTGGT CTGCTGATCG CCTCGGTGGA CACCAAGGGC AAGCCGGGTC TGGCCTGGCG CGCGCAGCAC GCTGCCGAGG CCGCCGGCCA CCGCGCCGAC CACCTGGGCA CCATCGCCGG CCTGAAGAAG GACATCGCGG GCCTGCAGGC CGAGAACAAG GCCCTCAAGG CCAAGGCCGC CGTGAGCGGC TCCGCGGGCA AGGCCACCGG CAAGGCCGCG GGCGTCACCG GCCTGCTGGG CAGCCAGGCC AAGGCCGGCA AGAAGGCCTT CGCCGCCAAG AAGCGCAAGG ACTCCTTCAT CGACCGTGCG CTGGACGCCG TCGAGGACTC CTACAACACT GCCAAGAAGA AGGTCGCCTG A
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Protein sequence | MDPIRMIARP MLGGIFVATG MNHIKNPDYG AEVAQGFNDQ VLEPVGLGAD GPTLMKVHGY VSVVAGAGLA LGVAPRLCAL ALAADVTAVN LTANRFWEQE GEERQGTQIQ FLKDLAIAGG LLIASVDTKG KPGLAWRAQH AAEAAGHRAD HLGTIAGLKK DIAGLQAENK ALKAKAAVSG SAGKATGKAA GVTGLLGSQA KAGKKAFAAK KRKDSFIDRA LDAVEDSYNT AKKKVA
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