Gene Ksed_18880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18880 
Symbol 
ID8373393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1961935 
End bp1963995 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content73% 
IMG OID644992143 
Producthypothetical protein 
Protein accessionYP_003149654 
Protein GI256825694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCCC GCCCCCTGCT CTCGCGCACC CTGAGCGCCC TGACCCTCAC CTCCCTGGGC 
CTATTCACCC CGGCCACCGC CCAGGCCGCT GACGCCCCGG CCCCCTCGGT GCAGGTCGTC
GCCGACCCCA GCATCGAGCT GGTAGTGCTG GTGCTCGATG ACGGGTCGCC GACGGTGGAC
GCGTACACCG ACCGACTGGT CCGCGAGGGC GTGCCCCACC GGCTGGTGAA CCTGAACGCC
GCCGACCGGC CCACCATCGA CGCGTCCTTC CTGACCGTCG GCGGTCGCGC CGACCACGCC
GCCTTCCAGG GCGTCATCAC CCCCAACTCG GCTCCCGCGC AGCTCTCCGA GGCGGAGGCG
GACGCCCTGC GCGACTGGCA GGCGCGCTTC GCCATCCGCC AAATCTCGGC CTACGTCTAC
CCCTCGGCCG CCGTCGGCCT GCAGACCCCC GAGGCCGCCG GGCCCCTGGA CGACAGCACC
CTCCAGGTGA CCCCCAGCGC CCGGGCCGGC GCGTTCAGCT ACCTTGACGG CCCGGTGCCG
GTGGACGACG TGAACCCCGC GGTCACCGAG ACCTACGGGT ACCGCGCCGC CGCGCTGGAG
GGAGGCGCCG AGGCGGTGGC CACCAGCAGC GCGCCGTCGG GAGCCACCGC GGTGATGACC
GGCATCCACC GCGCCGACGG CCGGGAGGAG ATGTTCAACA CCTTCTCCTT CAACCGCTAC
CAGGTTCACA CCCGCATCCT GGTCCACGGC CAGATCGAGT GGCTGACCCG CGGCATCCAC
TTGGGCAGCT ACAGCAACGC GTTCTCCGTG CACTCCGACG ACACGTTCAG CGCCAGCAGC
CTGTGGAGCC CCCACGGCAA CTGCACCATC GGCGCCGGGT GCGACCCGGC CCAGGTGCTC
CCCGACGAGC CGGCCACCGC CCGGATGGAC GCGGCCGACG TGGAGTTCAT GCGCTCCTGG
CAGCAGCAGT GGGGCCTGAA GATCGACCAG GCCTTCAACG GCGCCGGCTC CCGGGAGTAC
GCCGCCACCC ACGGCACCGA CCCGTTGCTG GCCGCGCTGC GCACCCGACC CCGCGACTTT
CGCTTCATCA ACCACACCTG GAGTCACCGC CACCTGGGCT GCGAGCGCCA GTACGACCCG
GTGACCGGCG CTGCCAGCTG CCAGCGGGAT GCCGCCGGCG CCGTGGTGAC CGTGCCCCGG
GCCACCCTCG TCGAGGAGAT CCGGCGCAAT CTGGACTTTG CGTTCTGGAA CGGCCTGCCG
GTGGACCGCA CCGAGCTGAT CACCGGGGAA CACTCCGGCC TGCTGGGTGA CCCGGAGCTG
TCCACCGACA ACCCGAACCT GGGCGGCGCG CTGCGTAGCA CCGGGGTGCG GTGGATCGCC
GCGGACAACA GCCGCGACCC GTGGCAGCGC CCGGTGGGCC CGGCCCTCAC CGTGCCCCGC
CACCCGATGA ACATCTTCTA CAACGCGGCC ACCGAAGAGC AGCAGGTGGA CGAGTACACC
TGGATCTACT CCTCCCGGGC GGACGGTGGC TCCGGCCACT GCGAGACCGA CCCCCGCACC
ACCTGCCTGC CCCCGCTGAG CGGGGCGGAG GACTTTCAGG ACGTGCTGGT GCCCCGGGAG
GCGGCCAACG CCCTCTCCCG CGTGGTGAAC AACGACGCCC GCCCGCACTA CGTACACCAG
GCCAACCAGA CCGGCGATCG CATCATCTAC CCGGTGCTGG AGCGTCTGCT GACCGACTAC
CGCGCGATCT TCGCCGACAA CACGCCGCTG GTGAACCCCA CCCAGGCGGA GGCCGGTGAG
CAGCTGCGCG CTGCGGCGGC CTGGCAGGCC GAGGGCGACG CCCGCGCCAC CTGGCGCGGC
GGCCGGGTGC AGCTGCGCGC CACCGGCGAC GGCGCCACCA TCCCGGTCTC GATGCCGGCC
GGCACCACCA GTGGCTGGTC CCGCCTGCCC CAGGAGTACG CCGGCAAGGC CGTGGGCACC
TACGAGGTTG GCACCTGGCT GCCGCGCACC CTCACCGTTC CCGGCGACGG ATGGGGTGCC
TCGGCCACGA GGTCCTCGTG A
 
Protein sequence
MPPRPLLSRT LSALTLTSLG LFTPATAQAA DAPAPSVQVV ADPSIELVVL VLDDGSPTVD 
AYTDRLVREG VPHRLVNLNA ADRPTIDASF LTVGGRADHA AFQGVITPNS APAQLSEAEA
DALRDWQARF AIRQISAYVY PSAAVGLQTP EAAGPLDDST LQVTPSARAG AFSYLDGPVP
VDDVNPAVTE TYGYRAAALE GGAEAVATSS APSGATAVMT GIHRADGREE MFNTFSFNRY
QVHTRILVHG QIEWLTRGIH LGSYSNAFSV HSDDTFSASS LWSPHGNCTI GAGCDPAQVL
PDEPATARMD AADVEFMRSW QQQWGLKIDQ AFNGAGSREY AATHGTDPLL AALRTRPRDF
RFINHTWSHR HLGCERQYDP VTGAASCQRD AAGAVVTVPR ATLVEEIRRN LDFAFWNGLP
VDRTELITGE HSGLLGDPEL STDNPNLGGA LRSTGVRWIA ADNSRDPWQR PVGPALTVPR
HPMNIFYNAA TEEQQVDEYT WIYSSRADGG SGHCETDPRT TCLPPLSGAE DFQDVLVPRE
AANALSRVVN NDARPHYVHQ ANQTGDRIIY PVLERLLTDY RAIFADNTPL VNPTQAEAGE
QLRAAAAWQA EGDARATWRG GRVQLRATGD GATIPVSMPA GTTSGWSRLP QEYAGKAVGT
YEVGTWLPRT LTVPGDGWGA SATRSS