Gene Ksed_18700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18700 
Symbol 
ID8373375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1944574 
End bp1945854 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content69% 
IMG OID644992126 
Productmembrane protein involved in the export of O-antigen and teichoic acid 
Protein accessionYP_003149637 
Protein GI256825677 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGG CTGGGGCAGA GCCGCGGCCG CGCAGCCTCC GACGCAACTT CACCTCCGTC 
CTCGGCGCCA ACACGCTCTA TCGCCTCAGC CAGTGGCTGC TGATCGCGTT CATCGCCCAG
TGGGGAACCA AGGAGATGGT GGGCTACTTC GCCTTGGCCC AGGCCATCAC TGCCCCCGTC
TACCTCACGG TCGGGCTCAA CCTCCGCGCG GCGCGGGCCA CAGATGTCAG CCGACGCTGG
ACGGCCAGCC AGTACGGCAG CCTGCGGGAG ATCCTCAACG CCGCATCACT CCTGCTGTCC
TGCGCCCTGG CGTGGCTGGT CTCCCCCAGC ATCGACTTCC TCCTGCTGGT GGCAGCGGTG
GCCTGGAGCA AGGCCTCTGA GGCCTCGAGC CAACTGTCCT ACGGCTACTG GCAGCTCCGT
GAGCGGCTGG ACCTCATGTC CAGGAGCCTG TACCTGCGCT CCGCGTTGGG AGCCGCCAGC
TTCGCGGCCG TCTTCTGGTT CACTCGCGAC CTCCTGTGGG GGTGCGTGGT GATGGCACTG
GGGTGGACCT TGGTCACTGT CCTGCACGAC CGCCCCGTGG AGGCACGCCT ACGCCGGGAC
GACCCGGCTG ACTCCCCGAT GCCGGAGGCT GGTGCCACCC GGGCCTCGCT GGCCCGTGAG
GCCCTGCCTC TCGGAGTCAC CGCCGGTATC TCGTCGGTCA CTCTCAACAT CCCCCGCTAC
GCCCTGCAGT TCTTCCTCGG GACCGGCAGT CTCGGCCTGT TCGCCGCGCT CGCCTACCTG
GGCCAGACCA TCTCCATGGT CACCGGGTCC TTGGCCGACT CGATGATCGC CCGCCTCGCT
CGCGCCGCCC AGGCCGGACG GCGCAGGCAG TTCCTCCGGA ACCTCGGCAT CCTCGCCGGC
TTCTCCTGTG CCGTGTCACT CGTCGTCCTA CTCGGCGCTG CCGCCGTCGG TGCACCCATG
ACGAGACTGC TCCTCGGCGA GGAGTACGTG AACCAGCCGG TGCTCCTCAC GCTGCTCGCA
GGCGCCGCCT TCGCCACACT CCAGCGCGTG CTGGGCCGCG GCCTCCAGGG CGGACGACGA
TTCAGGGAGT TCCTCATCAT GAACGGGGTG ACGGCGGTCG GGGCCCTGGT GGCCGCGGTC
ACCCTGATCC CGAATTGGGG TCTGATGGGG GCAGCTCTCA CCTCCGGCCT GGGATTCTTC
CTGGGTTGTC TCGTGGGCTT GTACTACATC TGGCGCATGG TCCAGCGGAT GAAGCCCATC
GAGGCGGCTG AGGCACCCTG A
 
Protein sequence
MTTAGAEPRP RSLRRNFTSV LGANTLYRLS QWLLIAFIAQ WGTKEMVGYF ALAQAITAPV 
YLTVGLNLRA ARATDVSRRW TASQYGSLRE ILNAASLLLS CALAWLVSPS IDFLLLVAAV
AWSKASEASS QLSYGYWQLR ERLDLMSRSL YLRSALGAAS FAAVFWFTRD LLWGCVVMAL
GWTLVTVLHD RPVEARLRRD DPADSPMPEA GATRASLARE ALPLGVTAGI SSVTLNIPRY
ALQFFLGTGS LGLFAALAYL GQTISMVTGS LADSMIARLA RAAQAGRRRQ FLRNLGILAG
FSCAVSLVVL LGAAAVGAPM TRLLLGEEYV NQPVLLTLLA GAAFATLQRV LGRGLQGGRR
FREFLIMNGV TAVGALVAAV TLIPNWGLMG AALTSGLGFF LGCLVGLYYI WRMVQRMKPI
EAAEAP