Gene Ksed_18630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18630 
Symbol 
ID8373368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1938203 
End bp1939348 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content68% 
IMG OID644992119 
Productnucleoside-diphosphate-sugar epimerase 
Protein accessionYP_003149630 
Protein GI256825670 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG TCCTGACCGG CGCCCGTGGA TTCATGGGCT GGCACACCCG CCTGCGCCTG 
CACGCGCTGA CCGACCACGA GGTCGTCGCC GTGGGCCGCG AGGAGTGGGG TGACCTGCCA
CGGCTCGTCC GTGAGGCCGA CGCGGTCATC CACATCGCCG GGGTGAACCG CGCCCGCGAC
ACCGAGGGCG GCATGTCCGC CGACGAGCAG GTCAACGAGG GCAACGTGCG GTTGGCCCGG
GAGCTGGCCG AGGCCGTGCG CGGCGCCGGC CACCCGGTCC GCGTGGTGTA CGCCAACAGC
ATCCAGGCTG GGAACGGCAC CCCGTACGGG GCTGGCAAGC AGCGTGCCGG TGAGGTGCTC
CGTGAGGCTG CCGAAGCAGG TGGTGGCCAC CTCACCGAGG TGATGCTGCC CAACCTGTTC
GGCGAGCACT GCCGGCCGAA CTACAACTCC TTCACCGCCA CCTTCATTGA CAAGGTGATC
AACGGTGAGG AGCCCACCAT CAACGACAAC CCGGTGAATC TGCTGCACGC CCAGCGGGCA
GCAGCGGCAC TGCTTGAGGG TCTGGAGACC TCCGAGCCGG TGCTGGAGCC GCGCGGTGAG
GATGTCGGCG TGCAGCAGGT GTGGGACCTG CTGGTGGAGT TCCACTCCTC CTACGTCGAG
CGCGGGGAGA TCCCCGACCT CTCGACGCCC TTCCGCATCG ACCTGTTCAA CTCCTACCGG
GCCGCGCTCT TCCCCCAGCA CTACCCGGTC CAGCTCACGC CGCACGCCGA CGACCGCGGC
TTCTTCGTCG AGACCGTCCG CTGCGCCGGC GGGCAGGGCC AGTCGTCCAT CTCGACGACC
GTCCCGGGCA TCACCCGCGG CGAGCACTAC CACCTGAGCA AGATCGAGCG CTTCGCCGTG
GTCCAGGGCA CCGGCCGGAT GAGTCTGCGC AAGATGTTCA CCGACGAGGT CATCGACTTC
GACGTCACCG GTGACCAGAC CGCCGCGGTG GACATGCCGG TCGGCTGGGT CCACAACATC
ACCAACACCG GGGATGACAT CCTCATCACC CAGTTCTGGG TCCACGAGTT CTTCGACCCC
GAGAACCCCG ACACCTTCCC CGAGCCGGTC CGTCCGGCCG CCGATGCCGA GGAGAACGCC
CGATGA
 
Protein sequence
MRIVLTGARG FMGWHTRLRL HALTDHEVVA VGREEWGDLP RLVREADAVI HIAGVNRARD 
TEGGMSADEQ VNEGNVRLAR ELAEAVRGAG HPVRVVYANS IQAGNGTPYG AGKQRAGEVL
REAAEAGGGH LTEVMLPNLF GEHCRPNYNS FTATFIDKVI NGEEPTINDN PVNLLHAQRA
AAALLEGLET SEPVLEPRGE DVGVQQVWDL LVEFHSSYVE RGEIPDLSTP FRIDLFNSYR
AALFPQHYPV QLTPHADDRG FFVETVRCAG GQGQSSISTT VPGITRGEHY HLSKIERFAV
VQGTGRMSLR KMFTDEVIDF DVTGDQTAAV DMPVGWVHNI TNTGDDILIT QFWVHEFFDP
ENPDTFPEPV RPAADAEENA R