Gene Ksed_18070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_18070 
Symbol 
ID8373312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1880184 
End bp1880882 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID644992064 
ProductIon channel 
Protein accessionYP_003149576 
Protein GI256825616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.00210304 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.546721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGCA ACACGGTGCG TCCGCCGACG CCGTGGCACG TCAAGGTGCG GCGAGGCATC 
GCTGCCAACC CGTCGGCAGT GCTGTTGGTG GTGCAGCTGC TCAGCATCAT CGCGTACCCG
TTCACGACCG AGTCCGGTCC GGGGCGGCTG ACGCTCGCGC TGCTCGGGCT GCTGGTGCTG
GTGCTGGCCC TGCGGGCAGT CCGACGGACG CCCATGCTCA CCTGGGTGGG TGTGCTGGTG
GGTGGCCCGG CCGCGGTGCT GACGGTGTGG GAAGTGATCG CGCCGGACAA CGACGCGGTC
TACCTGGCCT CGATGGTCTT CCACGCGATC TTCTACTTCT ACGTGGTGTT CGCGCTGCTG
GTCTACATGT TCGCGGACAA CTGGGTCACC AGCGACGAGT TGTGGGCCAC CGGAGCGACG
TTCACCGTGG CGGTGTGGGC CTTTGCCTAC ACCTACGGTG CGGTGCAGGC GATCTGGCCG
GGGTCGTTCG CTGCTCCCCA CGGCGAGCAG TTGAGCTGGT TCGAGCTGAT CTTCCTGTCG
GCGACGACCA TGACCGGCAC CGGGCTGTCC GACATCGCCC CGGCTGGCAA CCACGCCCGG
TCGTTCATCA TCCTCGAGGA GCTGGCGGGC ATGAACTACG TGGCCCTGGT GGTCGCGCGC
CTCCTAGGCC TGACCCTGGC CAAGTTCCGC GGCCGCTGA
 
Protein sequence
MYRNTVRPPT PWHVKVRRGI AANPSAVLLV VQLLSIIAYP FTTESGPGRL TLALLGLLVL 
VLALRAVRRT PMLTWVGVLV GGPAAVLTVW EVIAPDNDAV YLASMVFHAI FYFYVVFALL
VYMFADNWVT SDELWATGAT FTVAVWAFAY TYGAVQAIWP GSFAAPHGEQ LSWFELIFLS
ATTMTGTGLS DIAPAGNHAR SFIILEELAG MNYVALVVAR LLGLTLAKFR GR