Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_18070 |
Symbol | |
ID | 8373312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 1880184 |
End bp | 1880882 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644992064 |
Product | Ion channel |
Protein accession | YP_003149576 |
Protein GI | 256825616 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.00210304 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.546721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCGCA ACACGGTGCG TCCGCCGACG CCGTGGCACG TCAAGGTGCG GCGAGGCATC GCTGCCAACC CGTCGGCAGT GCTGTTGGTG GTGCAGCTGC TCAGCATCAT CGCGTACCCG TTCACGACCG AGTCCGGTCC GGGGCGGCTG ACGCTCGCGC TGCTCGGGCT GCTGGTGCTG GTGCTGGCCC TGCGGGCAGT CCGACGGACG CCCATGCTCA CCTGGGTGGG TGTGCTGGTG GGTGGCCCGG CCGCGGTGCT GACGGTGTGG GAAGTGATCG CGCCGGACAA CGACGCGGTC TACCTGGCCT CGATGGTCTT CCACGCGATC TTCTACTTCT ACGTGGTGTT CGCGCTGCTG GTCTACATGT TCGCGGACAA CTGGGTCACC AGCGACGAGT TGTGGGCCAC CGGAGCGACG TTCACCGTGG CGGTGTGGGC CTTTGCCTAC ACCTACGGTG CGGTGCAGGC GATCTGGCCG GGGTCGTTCG CTGCTCCCCA CGGCGAGCAG TTGAGCTGGT TCGAGCTGAT CTTCCTGTCG GCGACGACCA TGACCGGCAC CGGGCTGTCC GACATCGCCC CGGCTGGCAA CCACGCCCGG TCGTTCATCA TCCTCGAGGA GCTGGCGGGC ATGAACTACG TGGCCCTGGT GGTCGCGCGC CTCCTAGGCC TGACCCTGGC CAAGTTCCGC GGCCGCTGA
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Protein sequence | MYRNTVRPPT PWHVKVRRGI AANPSAVLLV VQLLSIIAYP FTTESGPGRL TLALLGLLVL VLALRAVRRT PMLTWVGVLV GGPAAVLTVW EVIAPDNDAV YLASMVFHAI FYFYVVFALL VYMFADNWVT SDELWATGAT FTVAVWAFAY TYGAVQAIWP GSFAAPHGEQ LSWFELIFLS ATTMTGTGLS DIAPAGNHAR SFIILEELAG MNYVALVVAR LLGLTLAKFR GR
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