Gene Ksed_17990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17990 
Symbol 
ID8373304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1871276 
End bp1871896 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content71% 
IMG OID644992056 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_003149568 
Protein GI256825608 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0178877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.565782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG CACCCGGGAC CCCCGCGGCC GGCGCGGACC AGGCGGCGGC CCCCGAGCCG 
AGCCCGTGGA ACATCGCGAA CGCGCTGACC GTGCTCCGCA TCCTGATGGT GCCCGTCTTC
GTGTGGCTGC TGCTGCTCGA CCCCGGCGCC GGGGGCGAGC ACCTGGAGCT GTGGTGGGCG
TTCGCGGTGT TCGCCCTGGC GGCCATCACC GACCGCATCG ACGGCGACCT CGCGCGCCGC
CACAACCTGA TCACGAGCTT CGGCAAGATC GCCGACCCGA TCGCCGACAA GACCCTCATC
GGCTCGGCGT TGATCTGCCT CAGCGCGATC GACCTGCTGC CCTGGTGGGT GACCATCGTC
ATCCTGGCCC GCGAGCTGCT GATCACCGTG GTGCGCTTCG TGGTGATCCG CTACGGCGTG
ATGGCCGCGA GCCGCGGCGG CAAGCTCAAG ACCGTGCTGC AGTCCGTGGC CGTGGGCCTG
ATGCTGATGC CCGTCGGCGG CGTCGTGGCC ACCATCGCCT GGGTGGTGAT GGTGGCCGCC
GTGGTCGTGA CGGTGGTGAC CGGCATCGAC TACCTGCTGG ACGCCCGCCG CCTGTGGGCC
AAGGGGCGCG CGCGCTCGTG A
 
Protein sequence
MSTAPGTPAA GADQAAAPEP SPWNIANALT VLRILMVPVF VWLLLLDPGA GGEHLELWWA 
FAVFALAAIT DRIDGDLARR HNLITSFGKI ADPIADKTLI GSALICLSAI DLLPWWVTIV
ILARELLITV VRFVVIRYGV MAASRGGKLK TVLQSVAVGL MLMPVGGVVA TIAWVVMVAA
VVVTVVTGID YLLDARRLWA KGRARS