Gene Ksed_17920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17920 
Symbol 
ID8373297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1865607 
End bp1866323 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content66% 
IMG OID644992050 
Productpredicted transcriptional regulator 
Protein accessionYP_003149562 
Protein GI256825602 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.384504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCC CCTCCTCACG CGCCTTGGTA TTGCTATCGC TGTTACAGAC CCGACGCGCC 
TGGACAGCTT TAGAGCTAGC ACGGCACCTC GACATCGCAG AGCGCACCGT TCGCCGGGAC
ATCTCCCGCT TGCGGTCCCT CGGTTACGAC ATCCGCTCCG CGCCCGGACC GGGCGGCACC
TACCGACTGG TGCCGAGCAT CAAGATCCCG CCTCTGCTGC TTGATGCCGA CGAAGTCTGT
TCCCTGGTCA CGGGGCTGCT GATCCTGGAA GCCGGAAGCC CGGACACCGC CGCCGCGGCC
GTGCGGGCCA AACTCGAACA GCTCCTGCCA CCACGCCTAC GACACCGAGC TGCAGCGACC
GCCCTGGCGA CCCAGGTGAT CACCCCCGTC GCCAAGACCG CGGACTGGCA TCTGCTCGGC
CTGCTGGCCG AGGCCGTCGC CCAGCAGCAG CACCTGCAAT TCACCTACAC CGACCAGCAC
GGCGAAGTCA CCGAACGCCT CGTGAACCCG TACCGACACG TCCTGCGCAA CGGCATCTGG
TACCTAGTTG CCTTCGACAC GAAGCGCGAC GACTGGCGCT TGTTCCGCCT CGACCGCATC
CACGACGCAA GCCCACGGCC AGCACCTCGC GACTTCGACC TGCCGGACTT TCCCCCCACG
TCCATCGAGG ACTGGCTCAC CACCGACTTC GGACGCCAAC CAGCCCAGGT CAACTAA
 
Protein sequence
MDSPSSRALV LLSLLQTRRA WTALELARHL DIAERTVRRD ISRLRSLGYD IRSAPGPGGT 
YRLVPSIKIP PLLLDADEVC SLVTGLLILE AGSPDTAAAA VRAKLEQLLP PRLRHRAAAT
ALATQVITPV AKTADWHLLG LLAEAVAQQQ HLQFTYTDQH GEVTERLVNP YRHVLRNGIW
YLVAFDTKRD DWRLFRLDRI HDASPRPAPR DFDLPDFPPT SIEDWLTTDF GRQPAQVN