Gene Ksed_17690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17690 
Symbol 
ID8373274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1842452 
End bp1843555 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content67% 
IMG OID644992034 
ProductRecA protein 
Protein accessionYP_003149546 
Protein GI256825586 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.72475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.370795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA AGAACAACGC GGACCCGAAC GCGGAGCGTA CGAGGTCGCT CGATGCGGTG 
ATGTCCCAGA TCGAGAAGCA GCACGGCAAG GGCGCGGTGA TGCGTCTGGG CGACGACACC
CGTCCGCCGA TCGCCACGAT CCCGACCGGG TCCATCGCCC TGGACGTGGC ACTGGGTCTG
GGCGGTCTGC CGCGGGGCCG TGTCATCGAG GTGTACGGCC CGGAGTCCTC CGGTAAGACG
ACCGTGGCCC TGCACGCCGT GGCGAACGCC CAGAAGGCCG GCGGGATCGC GGCCTTCATC
GACGCCGAGC ACGCGCTGGA CCCGGAGTAC GCCAAGAAGC TGGGCGTCGA CGTCGACAAC
CTGCTGGTCT CGCAGCCGGA CACCGGTGAG CAGGCGCTGG AGATCGCGGA CATGCTGATC
CGCTCCGGCG CGCTGGACAT CATCGTCATC GACTCTGTGG CGGCGCTGGT GCCCCGTGCG
GAGATCGAGG GTGAGATGGG TGACTCCCAC GTGGGTCTGC AGGCCCGGCT CATGAGCCAG
GCGCTGCGCA AGATCACCGG CGCCCTGAGC AACACCGGCA CCACGGCCAT CTTCATCAAC
CAGCTGCGCG AGAAGATCGG TGTGATGTTC GGCTCCCCGG AGACGACCAC CGGTGGAAAG
GCGTTGAAGT TCTACGCCTC CGTGCGCATC GACGTGCGCC GCATCGAGAC GCTGAAGGAC
GGGACCGACG CGGTGGGCAA CCGCACCCGT GCCAAGATCG TCAAGAACAA GGTGTCCCCG
CCGTTCAAGC AGGCCGAGTT CGACATCCTC TACGGCCAGG GCATCTCCCG CGAGGGCGGA
ATCATCGACA TGGGGGTGGA GCACGGCTTC ATCCGCAAGT CGGGTGCCTG GTACACCTAC
GAGGGAGACC AGCTGGGGCA GGGCAAGGAG AACGCCCGCC AGTTCCTTAA GGACAACCCC
GACCTCACCG AGGAGCTCGA CCGCAAGATC AAGGCGAAGC TCGGCATCGG GGTCGACCCG
AACGCCCCCG TGGACGACGT CGACGCCGAA GCCGCGGCCC TGCGGGACGC CCCGGCGGCA
GACGAGGTCG AGGTCACCTT CTGA
 
Protein sequence
MAGKNNADPN AERTRSLDAV MSQIEKQHGK GAVMRLGDDT RPPIATIPTG SIALDVALGL 
GGLPRGRVIE VYGPESSGKT TVALHAVANA QKAGGIAAFI DAEHALDPEY AKKLGVDVDN
LLVSQPDTGE QALEIADMLI RSGALDIIVI DSVAALVPRA EIEGEMGDSH VGLQARLMSQ
ALRKITGALS NTGTTAIFIN QLREKIGVMF GSPETTTGGK ALKFYASVRI DVRRIETLKD
GTDAVGNRTR AKIVKNKVSP PFKQAEFDIL YGQGISREGG IIDMGVEHGF IRKSGAWYTY
EGDQLGQGKE NARQFLKDNP DLTEELDRKI KAKLGIGVDP NAPVDDVDAE AAALRDAPAA
DEVEVTF