Gene Ksed_17550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17550 
Symbol 
ID8373260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1825900 
End bp1826733 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content70% 
IMG OID644992020 
Producthypothetical protein 
Protein accessionYP_003149532 
Protein GI256825572 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.275335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.556349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC AGCACATCGA GTTCCACGTC GTCGCCGACT CCACCGGCGA CACCGCGGCC 
CGGGTGGCGC GCGCCACCGC GGCGCAGTTC CCCGACATCG AGACCCACAT CGTGCGCCAC
CCGCGCATCA CCACCGAGGA CACGCTGCGC TCGGTGATGG GCCGCATCGA GAACGACGCC
CACCAGGTGG TGGTGTTCTC CACCATCGTC GACGACCGCC TGCACGCCCT GGTGCACGAG
CTCGCCCAGC AGGCCCACCT CGAGCACGTG GACATGCTGG GCCCGGCCCT CGAGGCGGTG
GAGCGGGTCG CCGACCGGCA GGCCGAGCAC AAGGTGCGCC CGGTGGGCAT CAGCGCGGAC
TACTTCACCC GCATCGCGGC GATGGAGTAC GCCGTGGCCA ACGACGACGG AAACATGGGG
CAGACGCTCG ACCAGGCCGA CATCGTGCTC ATCGGCGTCT CCCGGTCAGG CAAGACGCCG
CTGTCGATGT ACCTGGGCTA CCTGGGCTAC AAGACCGCCA ACATCCCGCT GGTCAACGGC
ATCGAGCCGC CCGCGGAGCT GTTCGACGTG CCGCGCTGGA AGGTGGTGGG CCTGGTGATC
GACCCGGAGC GGCTCCAGGA CATCCGCTCG CGGCGCGTGA GGTCCCTCGG CGGCCGGCAG
GGGCGCGACG GCTACGCCGA CCTGATGAAG ATCTACGAGG AGCTCGACCA CGCCGACCAG
ATCTTCCGCC GCGTGGGGTG CCCCACCATC AACACCACCG AGCTGGCCCT CGAGGAGTCC
GCCGGACGCG TCATTGAACT GGTGGAGAAC CGGCGCGCTA CTCTTCGCGG GTGA
 
Protein sequence
MTTQHIEFHV VADSTGDTAA RVARATAAQF PDIETHIVRH PRITTEDTLR SVMGRIENDA 
HQVVVFSTIV DDRLHALVHE LAQQAHLEHV DMLGPALEAV ERVADRQAEH KVRPVGISAD
YFTRIAAMEY AVANDDGNMG QTLDQADIVL IGVSRSGKTP LSMYLGYLGY KTANIPLVNG
IEPPAELFDV PRWKVVGLVI DPERLQDIRS RRVRSLGGRQ GRDGYADLMK IYEELDHADQ
IFRRVGCPTI NTTELALEES AGRVIELVEN RRATLRG