Gene Ksed_17520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17520 
Symbol 
ID8373257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1822876 
End bp1823559 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content74% 
IMG OID644992017 
Product16S rRNA m(2)G 1207 methyltransferase 
Protein accessionYP_003149529 
Protein GI256825569 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.249472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.273906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACC ACTACTTCAG CGCGACCCCC GCGAGCCCCG CCGAGCAGCG CGAGATCACC 
GTGGAGCTCG CCGGGGAGCG ACGCAGGGTG GTCACCGCCG GCGGGGTGTT CTCCGCCGAG
CACCTCGACC ACGCAACGGC CTTCCTGCTC GATGCCGTGC CGGTGCCCGA GGCGCTCGCG
GCGCGCGGCG AGGGCGTGCA GCTGCTCGAC ATCGGGTGCG GCTGGGGGCC GATTGCCCTC
TCCCTGGCCC TCCAGGCACC GCAGGCCACC GTGTGGGCGG CGGAGGTGAA CGAGCGCGCC
GCCGACCTGG CCCGAGCGAA CGCCGCCCGC CTGGGGGTGC TGGCCGAGCG CCCCGGAGCC
CCGGGGGTGC ACGTGGTGGC CCCGGAGGAG GTGCCCGATG AGGCGCGCTT CGACGGCATC
TGGTCGAACC CGCCGATCCG CGTGGGCAAG GAGGCGCTGC ACGAGATCCT GGCCCACTGG
CTGCCGCGGC TGCGGGCCGA CGGCGCGGCC TGGCTGGTGG TGGGCAAGAA CCTCGGCGCA
CCCTCGCTGC AGCGGTGGAT CGGCGAGTTG TCCGGCAACT TCAGCCCAGA GGCTTCAGAT
GGCACCCTTC AGGTGGATTC CTTCACTTGT GACCGGGTGG CTCGCCACAA GGGCTTCTGG
GTGCTCGAGG CCCGCCCGGC CTGA
 
Protein sequence
MADHYFSATP ASPAEQREIT VELAGERRRV VTAGGVFSAE HLDHATAFLL DAVPVPEALA 
ARGEGVQLLD IGCGWGPIAL SLALQAPQAT VWAAEVNERA ADLARANAAR LGVLAERPGA
PGVHVVAPEE VPDEARFDGI WSNPPIRVGK EALHEILAHW LPRLRADGAA WLVVGKNLGA
PSLQRWIGEL SGNFSPEASD GTLQVDSFTC DRVARHKGFW VLEARPA