Gene Ksed_17500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17500 
Symbol 
ID8373255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1820107 
End bp1820928 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content74% 
IMG OID644992015 
ProductD-alanyl-D-alanine carboxypeptidase 
Protein accessionYP_003149527 
Protein GI256825567 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.050833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.192167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGACC GGTCGCCTCC GCCGCCGAGC GGGTCCAGCA ACTCGAGCAG CCCGAGCGGC 
ACCCCCTCCT CCGACGGGGT CAGCCCGCCG CCGTCCGACG GCACCAGCGC GCCATCCGCC
GACGAGGCTC CCGCCCCCTC GCAGGGGGAC GGCGCCGCGC CGACGCCCCA GCCCTCGCAG
GACGCCGCAC CCAACCCCCG TCCCGGTGAG GGAGGCGCAC GGTTCCAGGG CCAGTACCTG
CACCCCGAGA GCATCACCCC CCGTCCGGTC ACCGAGGTGG GCCCGCACAC CATCGTCAAC
CGGGCCAACG CGCTCCCCGA GGGGTGGGAG CCCGAGGAGC TGGTCGTCGT CGAGGGAGCC
GCCAAGCAGG GCGCGGAGAT GCGCCTGGTG CCGCAGGCGT CCCGGGCCTG GGACGAGCTG
CGGGCTGCCG CGGCTGCCGA CGGCATCGAC CTGCGGCTGA ACGCCGCCTA CCGGTCGTTC
GCCGAGCAGG AACGGACCTG GGAGTACTTC AAGGAACAGG ACCCCGACCA CCTGATGGTC
TACGTCGCCG CCCCGGGACG CAGCGAGCAC CAGATGGGGC TGGCGATCGA CATCGCCGAC
ATGCCCACGT ACCCGCAGCC GGTGACGGAC AGCGAACGGG GGCAGTGGCT GGTGGAGCAC
GCCGCCGAGC ACGGGTGGGT GCTGCGCTAC CCGCAGGGGC GCCAGGCCGA GACGGGCTAC
CGGTACGAGG CGTGGCACTG GCGCTGGGTG GGCAAGGACC TCGCCCAGCA CCTGGCCGCC
AACCACCTGA CGATGGAGCA GTGGGCCGGC CTGGTGCGCT GA
 
Protein sequence
MVDRSPPPPS GSSNSSSPSG TPSSDGVSPP PSDGTSAPSA DEAPAPSQGD GAAPTPQPSQ 
DAAPNPRPGE GGARFQGQYL HPESITPRPV TEVGPHTIVN RANALPEGWE PEELVVVEGA
AKQGAEMRLV PQASRAWDEL RAAAAADGID LRLNAAYRSF AEQERTWEYF KEQDPDHLMV
YVAAPGRSEH QMGLAIDIAD MPTYPQPVTD SERGQWLVEH AAEHGWVLRY PQGRQAETGY
RYEAWHWRWV GKDLAQHLAA NHLTMEQWAG LVR