| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_17320 |
|---|
| Symbol | |
|---|
| ID | 8373237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1793199 |
|---|
| End bp | 1795688 |
|---|
| Gene Length | 2490 bp |
|---|
| Protein Length | 829 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644991998 |
|---|
| Product | ComEC/Rec2-related protein |
|---|
| Protein accession | YP_003149510 |
|---|
| Protein GI | 256825550 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.111271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0143903 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGCC ACGCGGCCGG GGCACGTGAC CGGTCACGGC TCGACCTCCG GCTGCTGGTC
CCCGCGCTGG TCGCCTGGGC GGTGGCTGCC GCCGGCCTGG CCTGGGGCGC CCCGCTGCGC
TGGGCCTGCG TCGGCGGGTG CGCCCTGGTG GCCGCCGGTG GCCTGTGGTG GTTCCGGCGG
CCCGGGCGGG ACCGCGCCCG GGTGGGGGCG GCGGTGCTCA CGCTCAGCGG CATCCTCACT
GCCCTGCTGC TGGGGGTCTC CACCCTGGCC GAGACCTCCC GGCAGCAGGG CCTGGTGGCC
CGGGCCATCG CCGAGGAGGC GGTCGTCAGC GCCGAGGTCA CCCTCACCGC CGACGCCCGG
CGGGTGGTGA GCGAGGGGCG CTTCGGACGC AGCGAGCTGG TGCTGCTGCG GGCCCGGGCA
CACCGCATCG AGCACCGCGG GCAGGAGTCG GCGGCCAACG CGCCGGTGCT GGTGATCGCG
CGGCCCGGCT CGGGCTGGGA CGAGCTCACA TGGCGCACCC GGCTGGAGGT GACCGGCCTG
GTGGAGCCCA GCGACCCCGG GGACGACGTG GTGGCCGTGC TGTCGCCGGC GAAGGGGCCG
CAGGAGGTCC GGCCGCCGGG CGGGGGCTGG CGGGTGGCCG AGAGCCTGCG CGAGGGGCTG
CGTGAGTCGA TGGACCCGGT CTGGACCGAT GCCCGCGGCC TGGTGCCCGG CCTGGTCCTG
GGCGACACCT CGCTGACGCC CGAGGAGCTC ACCGAAGCCA TGAACGAGAC CGGCATGACC
CACCTCAGCG CGGTGAGCGG GTCCAACGTC GCGATCGTGG TGGGTGCCGT GCTGTGGGTG
TGCACGGGGG TGGGCGTGCC GCGACGCCTC AGACCGTGGG CGGCCGCGTT GGCGCTGGGA
GGGTTCGTGG TGCTCGCGCG CCCCGAGCCG TCGGTGCTGC GCGCCGGGGT GATGGGCGGC
GTGGCCCTGG TGGGCATGAC CGCCTCGCGC CGGGCGGCCT CGCTGCCGGC ACTGGCCACG
AGCATGGTGC TCCTGCTGGT GTGGGACCCG TGGCTCGCGC GGTCCTACGG GTTCGCGCTC
TCGGTGCTGG CCACGCTCGG CCTGGTGCTC TTCGTGCGGC CCTGGGCCGA GGCGCTGCGG
CGGCGCTGGC CGGCGGTGCC CGAACCGGTG GCGCAGGCGT TGGTGATCCC GGTGGCCGCG
GCGCTGACGA CGGCCCCCGT GGTGGCGATG CTGCAGGGGC AGGTGAGTGT GGTGGGCCTG
CTCACCAACC TGGCTGCGGC CCCGCTGGTG GCCCCGGCGA CGGTCGGCGG TGTGGTGGTG
GTGCTGGTGC ACCCGGTGGC CGAGCCCCTC GCCGACGCCA TCGCCTGGGT GGCCGCGGCT
CCGGCGCAGG TGATCGGGTG GATTGCCCGG GCCGGGGCCG CGGTTCCCCA CGGGGCGGTT
CCCTGGCCCG CCGACGGCCG GGGAGGGCTC GTGCTGGCGG TGGTCCTGGC CCTGGTGGTT
GTGAGCGGCC CCCCGCTGGT GCGTCTGCTG GCCCGGCCCG GCCGGTGGCG CGACATGGTG
ACGGCCTCGG CCGGGTGCAC GGCGCTGGTG CTCGGGGTGC TCTGGGCCGG GCCGCGCCTC
CCTGCGGCGG TGCCCGGCCT CGGCAGCGCC GGCGCCGCGA CCGACTGGCG CGTGGTGATG
TGCGACGTGG GCCAGGGGGA CGCCTTCCTG GTGCGCACCG CTCCCGACCG TGCGGTACTG
GTGGACACCG GACCCCCTGG CGCCCGCACG CCCTCCTGCC TGCGCGCAGC GGGGGTCCGT
GCCCTGGATG CCGTGGTGGT CACCCACGCG CACGCCGACC ACTCGGGGAA CCTGGGAGCC
GTGCTCGATG CGGTGCCCGT TGGCGCCGTC TGGGCGTCGC CGTCCGAGCT CGCCCGTCCG
ATGCAGCCGG GGCACCCCGC GGAGTGGCGG GAGGTCGCGC GCGCCCGGGG CACCCCCATC
GAGCCGTTCG CCGCAGGGGA CCGGGTGGAC CTGGGTGCGG CCCGCCTGAC GGCCGTGTGG
CCCCGCGCCG GGGTGGACGT GGCCCCCGAC GACCGCCGCA ACGACGGCAG CCTCGTGCTC
CACGCCGAGG TGGGAGCGGC CGGGCCGGCA GCAGGGGCGG CCGGCGGTGC CTGGGTCCCG
GCAGACGGTG GTGCGGCACC GGTGCGGGTG TTGCTCACGG GGGACCTGGA GAAGACCGGT
GGGGCGGCGG TACAGGCCCT GACCGCCGAG GTGCCCGTGG ACGTGCTGAA GGTGCCGCAC
CACGGGTCGG CCCGCCAGGG GGAGGCACTG CTGGCCCGGG GCGCGCCGCT GGCGCTGGTG
AGTGCCGGCC GCGACAACGA CCACGGCCAC CCGGCGCCGG CGACCCTGGA ACGGCTCGAC
GCCGCGGGAA GCACCGTGGT CGGGACGGTC GAGCACGGAG ACGTCGCCGT CGGGGCCAGT
GACACGGGTC TGTGGTGGGC CCGCTTGTGA
|
|---|
| Protein sequence | MSSHAAGARD RSRLDLRLLV PALVAWAVAA AGLAWGAPLR WACVGGCALV AAGGLWWFRR
PGRDRARVGA AVLTLSGILT ALLLGVSTLA ETSRQQGLVA RAIAEEAVVS AEVTLTADAR
RVVSEGRFGR SELVLLRARA HRIEHRGQES AANAPVLVIA RPGSGWDELT WRTRLEVTGL
VEPSDPGDDV VAVLSPAKGP QEVRPPGGGW RVAESLREGL RESMDPVWTD ARGLVPGLVL
GDTSLTPEEL TEAMNETGMT HLSAVSGSNV AIVVGAVLWV CTGVGVPRRL RPWAAALALG
GFVVLARPEP SVLRAGVMGG VALVGMTASR RAASLPALAT SMVLLLVWDP WLARSYGFAL
SVLATLGLVL FVRPWAEALR RRWPAVPEPV AQALVIPVAA ALTTAPVVAM LQGQVSVVGL
LTNLAAAPLV APATVGGVVV VLVHPVAEPL ADAIAWVAAA PAQVIGWIAR AGAAVPHGAV
PWPADGRGGL VLAVVLALVV VSGPPLVRLL ARPGRWRDMV TASAGCTALV LGVLWAGPRL
PAAVPGLGSA GAATDWRVVM CDVGQGDAFL VRTAPDRAVL VDTGPPGART PSCLRAAGVR
ALDAVVVTHA HADHSGNLGA VLDAVPVGAV WASPSELARP MQPGHPAEWR EVARARGTPI
EPFAAGDRVD LGAARLTAVW PRAGVDVAPD DRRNDGSLVL HAEVGAAGPA AGAAGGAWVP
ADGGAAPVRV LLTGDLEKTG GAAVQALTAE VPVDVLKVPH HGSARQGEAL LARGAPLALV
SAGRDNDHGH PAPATLERLD AAGSTVVGTV EHGDVAVGAS DTGLWWARL
|
|---|
| |