Gene Ksed_17300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17300 
Symbol 
ID8373235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1792144 
End bp1792575 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content71% 
IMG OID644991996 
Producthypothetical protein 
Protein accessionYP_003149508 
Protein GI256825548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.00278724 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00345743 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGACACGA CAACCCTGCG CGACGCTCCG CCGCCGGAGT ACGCGATCGT CGGGGAGATG 
CTCATGCCCG AGCAGCTCGT GCGCTCCCTG GACCTGTCGT CGCTCGACGC GATCCAGCAC
GCGGCGGACG AGCTCAAGGT GACCCCCAGT GCGCTGGTCG TCCGCGCCCA GGGCCTCAAG
CTCCTCGGGT GGGACGTGGC ATGCGAGCAC CTGCGCGAGC TCGGCGAGGC CTTCCGCGGC
AGGCCGAAGA AGCAGGCGCG CCAGCCCAAG CCAGTCAACG CCGTCCGCAA GTACAACGGG
CGCAGGTTCA CGCGCGCGAT GCTGGCCGCG GTCGACGACG GCGCGATGAG CCCGGGCGAG
TTCTGCCGGG TCGTCGGCGC TCGCAAGATC AAGCCCGAGG ACCTCGACGA GCTCGGTAGG
GCGGTCGGTT GA
 
Protein sequence
MDTTTLRDAP PPEYAIVGEM LMPEQLVRSL DLSSLDAIQH AADELKVTPS ALVVRAQGLK 
LLGWDVACEH LRELGEAFRG RPKKQARQPK PVNAVRKYNG RRFTRAMLAA VDDGAMSPGE
FCRVVGARKI KPEDLDELGR AVG