| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_17260 |
|---|
| Symbol | |
|---|
| ID | 8373231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1788012 |
|---|
| End bp | 1789253 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644991992 |
|---|
| Product | selenocysteine lyase |
|---|
| Protein accession | YP_003149504 |
|---|
| Protein GI | 256825544 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.118877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0290981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCG CTCCCACCTC CGCCCCCGCC GTGGACGCCG TCCACGCCGC TGCCCCGTCG
GCCCCCGCCG TGGACGCCGT CCACGCCGCT GCCCCGTCGG CCTCCGACGC CTCACAGCCG
GCCCCCGGTG CCGCCGGGAC GCGCGACCTC GCCTGGCTGC GCGACCAGTT CGCCACCACC
GGGGGCTACC TCAACGCCGC GACCTGTGGC CTGCCGACCC GCTCCACCAC CGAGGCGATG
GCGCGCGACG CCCGGCGCTG GACCACCGGC GACGTCTCCC CGGTGACCTA CCACGACGAC
GTGGAGCGCG CGCGGGCCCT GTACGCCGGC CTGGTGGGTG TCCGTCCGGA GCGGGTGGCC
ACGGGCTCGC AGACCTCCGT GTTCGCCGGC ATGATCGCCG CAGGGGTCCC CGACGGGGGC
GAGGTGGTCG TGGTGGACGG CGACTTCTCG AGCCTCGTCT ACCCCTTCCT GGTGCAGGCC
GACCGCCCGC ACCCCACCCG CGAGGGCGGC CGCATCACCG TGCGCTCCGT GCCCCGGGCG
GAGCTGTGCT CCTCGCTGGG CGAGAACACG GCCGCGGTCG TGTTCAGCCA CAGCCAGTCC
GCCTGCGGGA GCCTCACCGG CATCGATGAG GTGACGGGCG CCGCATCGGA AGTCGGCGCC
CTGACCGTGT GCGACACCAC CCAGTCCGTC GGCTGGTCCC CGGTGGACGC CTCGGCGGTC
GACGTCACCG TGTGCTCGGC CTACAAGTGG ATGTGCCACC CGCGCGGCGT CGCATACATG
ACCGTCTCGG ACCGGGCCAT GGAGGCACTG GTCCCGGTGA ACGCGGGGTG GTACGCCGGC
GAGGTCATCT GGGACTCCAT GTACGGCCCG GCCATGCAGC TCTCCGGCCG CGCCTCCCGC
TTCGACGTCT CGCCCGGGTG GCCGCTGTGG CCCGGGGCGG TCGCGGCGCT GGAGGACTTC
GTGCAGGTGC CGGCGACGCA GCTGCGTGAC CACTCGGTGG CCCTCACCAA CGCGTTCCGG
CGGGGGATGG GCCTGGATGA CTCCGACTCG GCGATCGTCA GCCTGGGCCT GCCCGACGAG
GCCGCCGTGG CCGCTGCGCG CGCGGGCCTG ACGCTCTCGC AGCGTGCCGG GGGAGTGCGC
CTGAGCTTCC ACGTGTGGAA CACGCAGGCC GACGTCGAGG CCGCCTTGGG GGTCCTCACC
CCCTTCGTGT CGTCCACTGC CGGGGGATCC CTGCGGGGCT GA
|
|---|
| Protein sequence | MVAAPTSAPA VDAVHAAAPS APAVDAVHAA APSASDASQP APGAAGTRDL AWLRDQFATT
GGYLNAATCG LPTRSTTEAM ARDARRWTTG DVSPVTYHDD VERARALYAG LVGVRPERVA
TGSQTSVFAG MIAAGVPDGG EVVVVDGDFS SLVYPFLVQA DRPHPTREGG RITVRSVPRA
ELCSSLGENT AAVVFSHSQS ACGSLTGIDE VTGAASEVGA LTVCDTTQSV GWSPVDASAV
DVTVCSAYKW MCHPRGVAYM TVSDRAMEAL VPVNAGWYAG EVIWDSMYGP AMQLSGRASR
FDVSPGWPLW PGAVAALEDF VQVPATQLRD HSVALTNAFR RGMGLDDSDS AIVSLGLPDE
AAVAAARAGL TLSQRAGGVR LSFHVWNTQA DVEAALGVLT PFVSSTAGGS LRG
|
|---|
| |