Gene Ksed_17230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17230 
Symbol 
ID8373228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1784868 
End bp1785569 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content69% 
IMG OID644991989 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_003149501 
Protein GI256825541 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.302677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCC GGAAGAACGA GCCCGGGCTG CGGAACACCG AGCCACTGAC CGAACGACAG 
ACGCGTGTAC TGGAGGTCAT CCGCCGCTCC ATCGACGAGC GCGGGTACCC GCCGAGCATG
CGTGAGATCG CTGAGCAGGT GGAGCTGGCC TCGGCCAGCT CCGTGCAGCA CCAGCTCAAC
GCCCTGCAGC GCAAGGGCTA CATCCGCCGC GACCCCAACC GCCCCCGGGC GCTGGAGATC
CTCGATGCCG CCTGGCCCGG GGACCGCGGC TACCGCAAGC TCGACGAGGA GACCTGGGAC
CCGTCCGAGG CCGCGGACAA CCACCCGCCG GCCTCGTACG TACCGGTGGT GGGGCAGATC
GCCGCCGGCG GCCCGATCCT GGCCGAGGAG CACATCGAGG ACGTCTTCCC GCTCCCCCGC
CAGATCGTGG GCGACGGTGA GCTCTTCCTG CTGCGCGTCA AGGGCGACTC GATGGTGGAC
GCCGCCATCT GCGACGGCGA CTGGGTGGTC GTGCGCCGCC AGCAGGCCGC CATCAACGGC
GACATCGTGG CCGCGATGCT CGACGACGAG GCGACGGTGA AGACCTACAA GAAGGTCAAG
AACCAGATCT GGCTGCAGCC GCACAACCCG CTGTTCGACC CCATCGACGG CAACGACGCC
ACCATCCTGG GCAAGGTCAC CGCGGTGCTG CGTCGGGTCT GA
 
Protein sequence
MAIRKNEPGL RNTEPLTERQ TRVLEVIRRS IDERGYPPSM REIAEQVELA SASSVQHQLN 
ALQRKGYIRR DPNRPRALEI LDAAWPGDRG YRKLDEETWD PSEAADNHPP ASYVPVVGQI
AAGGPILAEE HIEDVFPLPR QIVGDGELFL LRVKGDSMVD AAICDGDWVV VRRQQAAING
DIVAAMLDDE ATVKTYKKVK NQIWLQPHNP LFDPIDGNDA TILGKVTAVL RRV