Gene Ksed_17160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17160 
Symbol 
ID8373221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1776071 
End bp1777420 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content74% 
IMG OID644991982 
Productsignal transduction histidine kinase 
Protein accessionYP_003149494 
Protein GI256825534 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.273662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC GGCACCGGCT GGGGGAGCGG CTTGCGACCC TGAGGGGTCC CGAGCCGTCG 
CACAGCGCTC CCCAGGTGAA CCCCACCTGG CGCCAGAACG CCGTGCGGAT CGCCTTCGTC
GTGGCGGTGG GAGCCATCAT CCACATGCTC TCCTACGGCT TCGTGGGCGG CATCGAGGAC
CCCGAGCTGC GGGCCCAGCT GGAGGAGCTC CGCCTCATCG ACATCGGCCT CGGCCTCGTC
GCGGTGCCCC TGCTGTTGGC CCGTCGCCGC TGGCCGGTGG TCGTGGCCGT CCTGACCGGC
GCGCTGATGC CCTTCTCATC CTTCGCGATC GCGGCCTACC TCTACGCGCT GGTCTCCCTG
TCCAGCCGGC GCCGCGTGAT CCCCATCCTC GTCGCCCTGG CGTGCCTGGC CCCGGCCTCG
TGGGTCGTGC AGACGGCCAT GGACCGCTGG GTGCTTGAGC ACGAGACCGG CTGGGGCGCC
GTCGACTTCC TCGCCAACCA GACGTTCCTG CTGATGGTGG CGCTGGTGTT CGTGCTGCTG
GGCTGGAACA TCGGCGCCCG GCGCGAGCTG GCCTGGGCCG TCGAGCAGCA GTCCGCCGCC
GCCGAGCGGG AGCAGGTGGC CCGCGTGGCG CAGGCCCGCT TGGCCGAGCG CGCCGCCATC
GCCCGCGAGA TGCACGACGC GCTCGGCCAC CGCCTGTCGG TGGTGTCCAT GCACGCCGGT
GCGCTGGCCT ACCGCCAGGA CATGCCGGCC GATGAGGTGC GCCAGGCGGC CGGGACCATC
GCCGGCCAGG CCCGCACGGC GTTGGAGGAC CTGCGTGAGA TCCTCGGCGT CCTGCGCTCC
ACCGACGCCG ACGGTGCCCC CGTCGAGGGG TCACCCCAGG TGCCCGACCT GTGCCGCCTC
CCCACGATGG TGGACGAGAC CGCGGGCATG GGCTGCACCA TCGACCTCGA GGTGCCCGAG
CGCCTGTGGG TGCAGATCCA CGAGAGCCTG CCGGGGTCGA CCAGCCGTCA CGCCTACCGG
GTGGTGCAGG AGGCGGTGAC GAACGCCTGC AAGCACGCGC CGGGGCACCC GATCCTCATC
GAGATGGGGG GTGCGCCGGG CCGCGGACTG ACCTTGCGGG TGGAGAACCC CCTGCCTGCC
CCCGAGGAGG CGCCCTCGGA CGTCGTCAGC GGCGGCATGG GGCTCACGGG CATGGCCGAG
CGCGTCGCCC TGGCCGGGGG CGAGCTGGAG GCCGGCCGGC AGGAGGGCAG CTTCGTGGTG
GAGGCGTGGT TGCCCTGGGC CGGTCGGCGC GCGGCCACCC CCTCGTCCAC CGACAGGACG
GCACAGCTCA ACGGGAGCAT GGCCCCGTGA
 
Protein sequence
MSARHRLGER LATLRGPEPS HSAPQVNPTW RQNAVRIAFV VAVGAIIHML SYGFVGGIED 
PELRAQLEEL RLIDIGLGLV AVPLLLARRR WPVVVAVLTG ALMPFSSFAI AAYLYALVSL
SSRRRVIPIL VALACLAPAS WVVQTAMDRW VLEHETGWGA VDFLANQTFL LMVALVFVLL
GWNIGARREL AWAVEQQSAA AEREQVARVA QARLAERAAI AREMHDALGH RLSVVSMHAG
ALAYRQDMPA DEVRQAAGTI AGQARTALED LREILGVLRS TDADGAPVEG SPQVPDLCRL
PTMVDETAGM GCTIDLEVPE RLWVQIHESL PGSTSRHAYR VVQEAVTNAC KHAPGHPILI
EMGGAPGRGL TLRVENPLPA PEEAPSDVVS GGMGLTGMAE RVALAGGELE AGRQEGSFVV
EAWLPWAGRR AATPSSTDRT AQLNGSMAP