Gene Ksed_17120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17120 
Symbol 
ID8373217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1773587 
End bp1774138 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content72% 
IMG OID644991978 
Productpredicted thioesterase 
Protein accessionYP_003149490 
Protein GI256825530 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.0664935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGG GGTGCGCTGA CGTGGCGCGG CAGGTGCAGC TCACCCGCGC CACCCTCCGC 
CCGCGGCGAC CGGTGCCGGA GATGGGGGTG TTGGACCCCT CCGTGACGCG GATGCGGGTG
CGCCCGGGCG ATCTCGACTT CTACCTCCAC GTGAACAACG GCACGTACCT GCAGATGATG
GACGTGGCGC GCAGCAACTA CATCGCCGAC GTGGGCGGCT TCCCGCTGTT GAACGAGCGC
CGGTGGTACC CGGTGGTGGC CTCCCAGACG GTCACCTACA AGCGGTCACT GACCCTGGGG
CAGCGGTTCG AGATCACCAC TCGCGTGGTG GGTTGGGACC AGCGCGTGGT CTACCTGGAG
CAGCTGTTCA GCCGCGGTGG TCGCCAGGTG GCCCGCGGAT GGGTGGCCGG TCGCTTCCTC
ACGCGGGGGA GCGGGGAGCG GGTGCCCGCG CCGGACGCGA TCGCCCTGCT CGATGCGGGC
GCCGTCGCCC CGGAGCTGCC CGCCGAAATC GCCGCCTGGG CGCACGCCGT GGGGGTGGCC
CACCGCGGGT GA
 
Protein sequence
MTAGCADVAR QVQLTRATLR PRRPVPEMGV LDPSVTRMRV RPGDLDFYLH VNNGTYLQMM 
DVARSNYIAD VGGFPLLNER RWYPVVASQT VTYKRSLTLG QRFEITTRVV GWDQRVVYLE
QLFSRGGRQV ARGWVAGRFL TRGSGERVPA PDAIALLDAG AVAPELPAEI AAWAHAVGVA
HRG