Gene Ksed_17030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17030 
Symbol 
ID8373208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1762699 
End bp1763988 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content69% 
IMG OID644991970 
ProductMn2+/Fe2_ transporter, NRAMP family 
Protein accessionYP_003149482 
Protein GI256825522 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.400291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA CGACCGCCCC ACCCGGCACC CAGCCCGAAC AGCGCGGGGG CTTCACCCTC 
ATCGGCCCCG GCCTGGTCGT TGCGGCCACC GGTGTGGGCG CCGCGGACCT GGTGGCCACC
GTCATCGCCG GGCAGAAGTT CGGCTACGCC CTGCTGTGGG CCGTCATCGT CGGCTGCGTC
CTGAAGATCG CCCTCGTGGA GGGAGCCGGT CGCTACAGCC TGGCCACCGG CCACACCATC
TACGAGGGCT GGCGCAGCCT GGGCCGGTGG ACCTCCTGGT ACTTCGCCCC CTACATCGTC
ATCTGGGGCT TCGTGTACGG CGCCGCGGCC ATGGCCGGCA CCGGCATCCC CCTGAACGCC
CTGCTCCCCA GCCTCTCGGT GGCCTGGTGG GGGGTCATCT CCGGTCTCAT CGGCGCCGGC
CTGGTGCTGG TGAGCCGCTA CGCCGTGTTC GAGAAGATCT GCGCCGCACT GGTGGGCGTC
ATGTTCGTGG TGATGGTGCT GGCCGCCGCG TTCACGGTGC CGAACCTGGG TGAGCTGGCA
GCCGGCCTGG TGCCCAGCAT CCCCGAGGGC GGCCTGGTGA ACCTGCTGTC GGTCGCCGGC
GGTGTGGGCG GCACGATCAC CCTGGCGGCC TACGGCTACT GGATCCGCGA GAAGGGCTGG
ACCACCGACG GCCACATGCG CCTGATGCGC GTGGACAACA CGGTGGCCTA CGTAGTGACC
GGCATCTTCG TGATCGCCAC CCTCATCGTG GGTGCGGAGC TGCTGTACTC CTCCAACCAG
GCCGTCGCCG GTGGTGAGAA GGGCCTGCTG CAGCTCTCCG ACGTGCTGGC CGAGCGCTAC
GGACGCTTCG TGGGCACCCT GTTCCTGGTG GGCTTCTGGG CCGCGGCGAT GTCCTCCCTC
ATCGGCGTGT GGAACGGCGT CTCGATGATG TTCGCGGACT TCGCGGGCGA CGCCCTGGGC
AAGCCCGAGA ACCACCCGGA CCGCCAGGCG CGCGGCAAGT GGTACGTCGC CTACGTCCTG
TGGCTGACCT TCCCGCCCAT GATCATGATG TTCGTGGGCG AGCCGGTCTG GCTGATCCTG
GCCTACGGCG TGCTGGGCGC GTTCTTCATG CCCTTCCTGG CCGTGACGCT GCTGTGGATC
CTCAACAGCG ACCGCACGCC GGCCATCTGG CGCAACACGT GGCTGAGCAA CGTCCTGCTG
GTGATCTGCA CGGCGCTGTT CGCCTACCTG GCGGCGCAGC AGCTGGTGAA CCTGGGCGGT
CAGCTGGCCG AGTTCGTCCG CGGTCTGTGA
 
Protein sequence
MATTTAPPGT QPEQRGGFTL IGPGLVVAAT GVGAADLVAT VIAGQKFGYA LLWAVIVGCV 
LKIALVEGAG RYSLATGHTI YEGWRSLGRW TSWYFAPYIV IWGFVYGAAA MAGTGIPLNA
LLPSLSVAWW GVISGLIGAG LVLVSRYAVF EKICAALVGV MFVVMVLAAA FTVPNLGELA
AGLVPSIPEG GLVNLLSVAG GVGGTITLAA YGYWIREKGW TTDGHMRLMR VDNTVAYVVT
GIFVIATLIV GAELLYSSNQ AVAGGEKGLL QLSDVLAERY GRFVGTLFLV GFWAAAMSSL
IGVWNGVSMM FADFAGDALG KPENHPDRQA RGKWYVAYVL WLTFPPMIMM FVGEPVWLIL
AYGVLGAFFM PFLAVTLLWI LNSDRTPAIW RNTWLSNVLL VICTALFAYL AAQQLVNLGG
QLAEFVRGL