Gene Ksed_17000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_17000 
Symbol 
ID8373206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1759900 
End bp1760871 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content74% 
IMG OID644991968 
ProductABC-type metal ion transport system, ATPase component 
Protein accessionYP_003149480 
Protein GI256825520 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.115214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGAACA TTTCCAAGAC CTACCCGGCC CGTGGCGGGG GTGAGGCGGT CCACGCGCTG 
GACGACGTCT CGCTCCAGAT CGACCGGGGC CAGGTGCACG GTGTGGTGGG CCCGTCGGGG
TCCGGCAAGT CCACGCTGGT GCGCTGCATC AACCTGCTCG AGCGGCCCAC CAGCGGCCGC
GTCACCGTGG ACGGCCGGGA GCTCACGGCC CTGTCCGCCG CCGAGGTGCG CCGCGCCCGC
CGCGAGATCG GCATGATCTT CCAGCACTTC AACCTGTTGG ACTCCCGCAC CGCGCTGGAG
AACGTCGCCC TGCCGCTGGA GCTCGCCGGG GTCGGCCGAC GGGAGCGTGC CCGCCGCGCC
ACCGAGCTGC TGGACCGGGT GGGGCTGGCC GAGCGCGCCG GCGCCCACCC GCGCCAGCTC
TCCGGTGGCC AGAAGCAGCG CGTCGCCATC GCCCGAGCAC TGGTGACCAA CCCGACCGTG
CTGCTCTGCG ACGAGGCCAC CAGCGCCCTG GACCCCGAGA CCACCGCCAG CGTGCTGGAC
CTGTTGCGCG AGCTCACCGC CGACCTCGGG CTGACCACCG TCCTCATCAC GCACGAGATG
GACGTCATCA CCCGCGTGGC CGATGCGGTG ACCCTGCTCT CCGCCGGGCG CGTCGTGGAG
TCCGGCACCC TCGCCGAGGT CGCCAGCAAC CGCGGCAGCG CCCTGGCCAC CCAGCTGGTG
CCCCGCCCGG TCCGCGGCCT GGACGCCGCG GACCTGCCGG CCGGCTCCCG CATCGTCACC
GTCGACCTGG CCACCCAGGA CGAGACCCGG GTGATCGCCG AGCTCACCGC CGCCGGCAAC
AGCGTGCAGG TGGCCGCAGC CCGGGTGGAG AACCTCCACG GCGCCCGCGT CGGGACCCTC
GACCTCCTCG TCCAGCCCGC CGGCTGGACC GCCCCCACCA CCGCGACCAC CCGACAGGAG
CTCCCCGCAT GA
 
Protein sequence
MENISKTYPA RGGGEAVHAL DDVSLQIDRG QVHGVVGPSG SGKSTLVRCI NLLERPTSGR 
VTVDGRELTA LSAAEVRRAR REIGMIFQHF NLLDSRTALE NVALPLELAG VGRRERARRA
TELLDRVGLA ERAGAHPRQL SGGQKQRVAI ARALVTNPTV LLCDEATSAL DPETTASVLD
LLRELTADLG LTTVLITHEM DVITRVADAV TLLSAGRVVE SGTLAEVASN RGSALATQLV
PRPVRGLDAA DLPAGSRIVT VDLATQDETR VIAELTAAGN SVQVAAARVE NLHGARVGTL
DLLVQPAGWT APTTATTRQE LPA