Gene Ksed_16940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16940 
Symbol 
ID8373200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1755020 
End bp1755475 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content73% 
IMG OID644991962 
ProductPTS system N-acetylglucosamine-specific EIIA component 
Protein accessionYP_003149474 
Protein GI256825514 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00830] PTS system, glucose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0253251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG TCCTGGCCCC CTGCGCCGGG ACGGTGCTGC CGCTGGCCGA GGTGCCGGAC 
CAGGTCTTCG CCACGCAGAT GGTGGGCGCC GGCGTCGCCG TCGACCCGCT GCGGCCGGAG
GGCAACCCCG GACGCGTCAC CGTGGTCTCC CCGCTCGCCG GCACGCTGCT CAAGGTCCAC
CCCCACGCCT TCGTGGTGAT GGGCGAGGGC CAGGGCGTGC TGGTGCACTT GGGCATCGAC
ACCGTCCAGC TCGAGGGCGA GGGATTCGAG GTGCACGTGG CCGAGAAGGA CACCGTCGCC
GCCGGCGATC CGATCGTCTC CTGGGACCCC GCCGCCGTCG ATGCGGGGGG CCGCAGCGCG
CTGGTGCCGG TGGTGGTCAT GGACTCCCCC GCCGACAGCA TCGAGCCCGC CGCCACCGGT
GAGGTGACGA CGGGTCAGGT GCTCTTCGCG CTCTGA
 
Protein sequence
MTDVLAPCAG TVLPLAEVPD QVFATQMVGA GVAVDPLRPE GNPGRVTVVS PLAGTLLKVH 
PHAFVVMGEG QGVLVHLGID TVQLEGEGFE VHVAEKDTVA AGDPIVSWDP AAVDAGGRSA
LVPVVVMDSP ADSIEPAATG EVTTGQVLFA L