Gene Ksed_16900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16900 
Symbol 
ID8373196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1752159 
End bp1753451 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content68% 
IMG OID644991958 
Productglucose/maltose/N-acetylglucosamine-specific phosphotransferase system IIC component 
Protein accessionYP_003149470 
Protein GI256825510 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.137948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG TGGACGAGAC CGGTCTCGCC GGCGAGCCGC CCGAGGGCGG CCTGACGACC 
GAGCCGAAGA AGCGCTTGAC CGACTCTGCG GCCTTCGCCT GGCTGCAGAA GTTCGGCAAG
TCGCTGATGC TGCCGATCGC GGCGCTGCCC GCGGCGGCGC TGCTGCTGCG CTTCGGCCAG
CCGGACATGC TCGGCGCCGA CGGGCTCGGC TGGGAGACCC CGGCCGCCGT CATCGGCGCC
GCCGGTGACG CGCTGTTCGC CAACCTGCCG CTGCTGTTCG CCATCGGCCT GGCCATCGGT
ATGGCGCGCA AGGCCGACGG GTCGACCGCG CTCGCGGCGG TGGTGGGCTA CCTCGTGTTC
AAGGGCGTGG GTGACGCGAT GAGCCCCCTC ATCCTCGGTG CCGCGCCGGA GGGTGAGGAG
CAGGAGCTCA TCAACTTCAA CGTCTTCGGC GGCATCATCA GCGGTCTGGT GGCCGCCTGG
CCGTGGCAGA AGTACCACCG CATCAAGCTG CCCGACTACC TGGGCTTCTT CGGGGGCCGC
CGTTTCGTGC CGATCGTGAC CTCGCTGGCC ATGCTCGTCA TCTCCGTGCT CATGAGCTTC
CTGTACAAGC CCTTCGACAT CGGGCTGACG AACCTCTCCC AGTGGGTGGC CGCCAACGAC
ATCCTGGGTG GCTTCATCTA CGGCACGGCG AACCGCCTGC TCATCCCGTT CGGCCTGCAC
CACGTGCTCA ACAGCGTGCC GTGGTTCGCC CTGGGCGAGT TCGAGGCCGG CGGCAAGACC
CACACCGGCG ACATCGCCCG CTTCCTCAAC GGCGACCCCA CCGCCGGTGC GTTCATGACC
GGCTTCTTCC CGATCATGAT GTTCGCCCTG CCGGCCGCGG CCATGGCCAT CTGGCACGAG
GCCAAGCCGG AGAACCGCAA GGCCACCGGC GGCATCATGA TCTCCGCGGC GCTGACCAGC
TTCCTCACCG GCATCACCGA GCCGCTGGAG TTCGCGTTCA TGTTCGTCGC CTGGCCGCTG
TACGTCATCC ACGCGGTGCT CACCGGCTCG TCCATCGCGC TGACCAACGC CCTGGGCATC
AAGGACGGCT TCGGCTTCTC CGCCGGGTTC ATCGACTACG CGCTGAACTT CAACATCGCC
ACCAAACCGT TGTGGATCCT GGGCATCGGG GTGGTCTACG CGATCATCTA CTACGTGCTG
TTCCGCGCCG TGATCCGGTG GTGGAACCTG CGGACCCCCG GTCGTGAGGA GGAGGGGCAG
GACTCGATGG TGCAGGCGGA CACCTCGGCC TGA
 
Protein sequence
MSTVDETGLA GEPPEGGLTT EPKKRLTDSA AFAWLQKFGK SLMLPIAALP AAALLLRFGQ 
PDMLGADGLG WETPAAVIGA AGDALFANLP LLFAIGLAIG MARKADGSTA LAAVVGYLVF
KGVGDAMSPL ILGAAPEGEE QELINFNVFG GIISGLVAAW PWQKYHRIKL PDYLGFFGGR
RFVPIVTSLA MLVISVLMSF LYKPFDIGLT NLSQWVAAND ILGGFIYGTA NRLLIPFGLH
HVLNSVPWFA LGEFEAGGKT HTGDIARFLN GDPTAGAFMT GFFPIMMFAL PAAAMAIWHE
AKPENRKATG GIMISAALTS FLTGITEPLE FAFMFVAWPL YVIHAVLTGS SIALTNALGI
KDGFGFSAGF IDYALNFNIA TKPLWILGIG VVYAIIYYVL FRAVIRWWNL RTPGREEEGQ
DSMVQADTSA