| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_16740 |
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| Symbol | |
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| ID | 8373180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 1729765 |
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| End bp | 1733760 |
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| Gene Length | 3996 bp |
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| Protein Length | 1331 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644991942 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003149454 |
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| Protein GI | 256825494 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.035115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.334813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGACC GCAAGGACGA CCTGGCGGCC GCCATCCGCG ATCATCAGGT GGTCGTCGTG
GCCGGCGAGA CGGGCTCGGG CAAGACCACC CAGCTGCCCA AGATCTGCCT GGAGTTGGGC
CGTGGCGTGA CCGGGATGAT CGGCCACACC CAGCCCCGCC GCATCGCCGC CCGGTCGGTG
GCCGACCGCA TCGCGCACGA GCTCGGGGTC GAGCTCGAGG ACCCGCAGGG GCCGGTGGGC
TACCAGGTGC GCTTCACCGA CCTCTCGAGC CCCACGACGC TCGTGAAGGT GATGACCGAC
GGCATCCTGC TCAACCAGAT GCAGTTCGAC CGGGATCTGC GGGCCTACGA CACCCTCATC
ATCGATGAGG CCCACGAGCG CAGCCTCACC ATCGACTTCA TCCTCGGGTA CCTGCAGCAG
CTGCTCCCGC GGCGGCCCGA CCTCAAGGTG ATCATCACCT CGGCGACCAT CGACCCCGAG
CGCTTCGCCC ACCACTTCGC GGACGCGGAG GGCAACCCTG CCCCCATCGT CGAGGTGTCG
GGGCGCACCT ACCCGGTGGA GATCCGCTAC CGGCCCCTCA GCCTCCAGGA GACGTCGAAC
GTTGCCGCGC TGGCCGACCC CGAGGGCTAC GACGAGACCG TCTACGGCGA GGACGACATC
GACCAGGTCA CCGGCATCGG CCAGGCCGTG CAGGAGCTGT GGACCGAGGT CATCGGCCCG
GACGACCCCC GCCCGCAGGA TCGCGACATC CTGGTCTTCT GCTCCGGGGA GCGGGAGATC
CGTGACGCGA CCGAGGCGCT GGAGGGGCTG AAGCTGCCCG GCACCGAGAT CGTCCCGCTC
TACGGCCGCC TCTCCTCCGC CGAGCAGCAG CGCGTCTTCG CCCCCCACTC CACGCGGCGC
GTGGTGCTGG CCACCAACGT CGCGGAGACC TCGCTGACCG TGCCCGGCAT CCGGTACGTG
GTGGACACCG GCACGGCCCG CATCTCGCGG TACAGCCAAC GGCTCAAGGT GCAGCGCCTC
CCCATCGAGA AGATCTCCCG GGCCTCGGCC AACCAGCGGG CGGGACGCTC GGGGCGCGTG
AGCGCGGGCA TCTGCATCCG CCTGTACTCG CAGGAGGACT TCGAGGCCCG CCCCGAGTTC
ACCGACCCGG AGATCCAGCG CACCTCGCTG GCCAGCGTGA TCCTGCAGAT GGCCCACCTG
GGCCTGGGGG ACGTGCAGCG CTTCGGCTTC GTCGACCCGC CGGACCCACG CCAGATCACC
GACGGCCTGC GCCTGCTGCA CGAGCTGGGT GCCGTGACCC GGGAGACCGC CTCCCGCGGC
GGTGTCGTGA CGCTGACCCC CGAGGGGCGC GAGCTCGCCT CCATCCCCGC CGACCCCCGC
CTGGCGCGGA TGCTGTTGGA GGCCCACCGC CGCGGGGCGC TGGCCGAGGT GCTCGTGATC
GTGGCCGGGC TGTCCATCCA GGACCCGCGG GAGCGGCCGG CCGAGAAGCG CGAGCGCGCC
GACCAGCTGC ACGCCCGCTT CAAGGACGAG AACTCCGACT TCGTCGCCCT GCTGAACCTG
TGGCAGTACG CCCGGGAGCG CAAGGGCAGC CTCTCCGGCT CGGCCTTCCG CCGGCTGTGC
CGTGCCGAGT TCCTGCACTA CCTGCGCCTG CGGGAGTGGG TGGACGTACA CCATCAGCTG
CGCAGCGTGG TCAAGGGCCT GGGCTGGCAG GACTCCTCGC TGGGCCTGGA GTCCGACCGC
ACCCGCCAGC GCGACCACGG CTTCGCGCCG GTGGACCCTG CGAAGGCCGA GGTGGTGCAC
CGCAGCCTGC TGCCCGGGCT GCTGAGCCAG GTGGGCCTGC GCGACCGGGA GACCCGGGAC
TACCTGGGCG CCCGCGGGGC GCACTTCTCC ATCCAGCCCG GCTCGGGGCT GTTCCGCACC
CGCCCGGACT GGATCATGTC CGCCGAGCTG GTGGAGACCA CCCGCCTGTG GGCCCGCACG
AACGCGACGG TGGACCCCGC GTGGGTGGAG GAGGCCGCCG ACCACCTGGT GAAGCGGCAG
TACTCCGAGC CACGCTGGTC GGCCAAGCGG GCCTCGGCGG TGGCCGACGA GCGCGTGACC
CTGCTGGGCA TCCCGCTGGT CGCCGGGCGG CAGGTGGGCC TCGCGACGGT GGATGCCCCG
CTGGCGCGGG AGCTCTTCAT CCGGCACGCG CTGGTGGAGG GGGACTGGCA GACCGGCCAC
GCCTTCTGGG GGCACAACAA GAAGGTGCTC GCCGAGGTGG AGCAGCTCGA GGCCCGCTCG
CGGCGCCGGG ACCTGCTCGA CGACGAGGCC CTGTTCGCCT TCTACGACGA GCGCCTGCCC
GCCGAGGTGG TCTCCGCCGC GCACTTCGAC AGCTGGTGGA AGTCCCACCG CCGCACGGAG
CCGCACCTGC TGGACCTCTC GGTCGAGGAG GTGGTCGGCG AGGACTCCAG CGGTGTGGAC
CTCGCGGACT TCCCGGCCAC CTGGGTGCAG GGTGACGTCG AGCTGCCCCT CACCTACCAG
TTCGAGCCCG GCACCGAGGC CGATGGGGTG ACGGCCCACC TGACGCTCAG CCAGCTCAAC
CGGGTGCGCG ACGAGGGCTT CGACTGGCAG GTGCCCGGCC TGCGCGAGGA GCTCGCGGTG
GCCCTGCTGC GCTCGCTGCC CAAGGCGGTG CGCCGGTCCT TCGTACCCGC GCCGGACCAC
GCGGCGGCGG CGCTGAAGGA CCTGTCCGAG CAACTCGCCG ACGCGCCCAC GGGGACCGCG
ACGGAGCCGA TGCGGGGGAG CGGCACCTTC GCTGCCGCGC TCGCCGGTGC GTTGACGCGG
CGGACCGGCA CGCCGCTGGA CCCGGCGGAC ATGGACACCG CCGCGGTCCC TGCACACCTG
CGCATGACCT TCCGGGTCAC CGAGGACGCC CCGGGCGAGG GCGGCAGGGT CCCGGGAGGG
AAGGGCGCGG GAGGCGGTGC CCCGCGCGGC AAGGGGTCCC GCGGCCGACG CGGGCCGCGC
CAGCGGCCCA CGGTGCTCGC CGAGGGCAAC GACCTGACGG CCCTGCAGGC GCAGCTCGCG
GGCTCGCTGC AGGAGGCCGT GGCGGGAGCG GCGGCCGGAC TCACCGCATC GGGGCTGACC
AGCTGGACCC TTGACGAGCT GCCAGCCCAC TTCGACGACG GCGGTGTGCA GGGCTGGCCC
GCCCTGGTCG ACGAGGGGAC GACGGCCGGG GTGCAGGTGT TCGCCGACCC CCGCCAGGCG
GCCCACGAGC ACGCACTCGG CCTGCGCCGC CTGGTGCTGG CCGGCTTCAA CCCGCCGTGG
AACCGCATCC TGCGCAGCGT GGACAACCAG ACCAAGCTGG CCCTGGGGGC CGCGCCGCAC
GGCTCCACCC AGGCCCTGCT GGAGGACGCG TTGGCGGCGG CGGTGGACTC GGTGATCGCC
GAGCGCCTGG CCGCGGCCGG GACGGTGCGC ACCCGGGAGG CCTTCGAGCA GGTGCAGGCC
ACCGCCGTGC AGCAGGCCGC GCCCCGCATC CTGGAGATGG TGGGCGCCGC CGGGAAGGTG
CTCGCGGGCG TGCCGGCCGT GGAGCGCGCG GTGGAGTCGA TGACGGCACC GCGCCTGGCG
CCGCTGCGGG AGGACCTGAC CGCCCAGCTG CGGGGGCTGG TGCACCCGGG TTTCCTGACC
CACGCCGGCT ACGAGCAGGT GCGGCACCTG CCTCGCTACC TGCAGGCCAT GGAGCAGCGG
GCGGCCAAGG CACCGACGGA TCTCGCGCGG GACACCGAGC GGCTGGCCGT GGTGCAGACC
GTGGAGCGCG AGCGGGCCGA CCTGCTGGCG GGCCTGGACG AGCTGGAGCG GCTGCGGCCG
GACGTCCGCG CGCTGCGCTG GATGACCGAG GAGCTGCGGG TCAGCCTGTT CGCCCAGCAG
CTCGGGACCG CACACGCCGT GAGCGAGAAG CGCATCTACG CGGCCATGGA CGCCGTCGAG
AAGGCACTGG AACAGAGCCG CGGCGCGGGG CGTTGA
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| Protein sequence | MVDRKDDLAA AIRDHQVVVV AGETGSGKTT QLPKICLELG RGVTGMIGHT QPRRIAARSV
ADRIAHELGV ELEDPQGPVG YQVRFTDLSS PTTLVKVMTD GILLNQMQFD RDLRAYDTLI
IDEAHERSLT IDFILGYLQQ LLPRRPDLKV IITSATIDPE RFAHHFADAE GNPAPIVEVS
GRTYPVEIRY RPLSLQETSN VAALADPEGY DETVYGEDDI DQVTGIGQAV QELWTEVIGP
DDPRPQDRDI LVFCSGEREI RDATEALEGL KLPGTEIVPL YGRLSSAEQQ RVFAPHSTRR
VVLATNVAET SLTVPGIRYV VDTGTARISR YSQRLKVQRL PIEKISRASA NQRAGRSGRV
SAGICIRLYS QEDFEARPEF TDPEIQRTSL ASVILQMAHL GLGDVQRFGF VDPPDPRQIT
DGLRLLHELG AVTRETASRG GVVTLTPEGR ELASIPADPR LARMLLEAHR RGALAEVLVI
VAGLSIQDPR ERPAEKRERA DQLHARFKDE NSDFVALLNL WQYARERKGS LSGSAFRRLC
RAEFLHYLRL REWVDVHHQL RSVVKGLGWQ DSSLGLESDR TRQRDHGFAP VDPAKAEVVH
RSLLPGLLSQ VGLRDRETRD YLGARGAHFS IQPGSGLFRT RPDWIMSAEL VETTRLWART
NATVDPAWVE EAADHLVKRQ YSEPRWSAKR ASAVADERVT LLGIPLVAGR QVGLATVDAP
LARELFIRHA LVEGDWQTGH AFWGHNKKVL AEVEQLEARS RRRDLLDDEA LFAFYDERLP
AEVVSAAHFD SWWKSHRRTE PHLLDLSVEE VVGEDSSGVD LADFPATWVQ GDVELPLTYQ
FEPGTEADGV TAHLTLSQLN RVRDEGFDWQ VPGLREELAV ALLRSLPKAV RRSFVPAPDH
AAAALKDLSE QLADAPTGTA TEPMRGSGTF AAALAGALTR RTGTPLDPAD MDTAAVPAHL
RMTFRVTEDA PGEGGRVPGG KGAGGGAPRG KGSRGRRGPR QRPTVLAEGN DLTALQAQLA
GSLQEAVAGA AAGLTASGLT SWTLDELPAH FDDGGVQGWP ALVDEGTTAG VQVFADPRQA
AHEHALGLRR LVLAGFNPPW NRILRSVDNQ TKLALGAAPH GSTQALLEDA LAAAVDSVIA
ERLAAAGTVR TREAFEQVQA TAVQQAAPRI LEMVGAAGKV LAGVPAVERA VESMTAPRLA
PLREDLTAQL RGLVHPGFLT HAGYEQVRHL PRYLQAMEQR AAKAPTDLAR DTERLAVVQT
VERERADLLA GLDELERLRP DVRALRWMTE ELRVSLFAQQ LGTAHAVSEK RIYAAMDAVE
KALEQSRGAG R
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