Gene Ksed_16600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16600 
Symbol 
ID8373166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1712171 
End bp1713247 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content68% 
IMG OID644991928 
ProductPhospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_003149440 
Protein GI256825480 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.044761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCG TCGTCGTCGG GGCAGCGGTG TCGCTGCTGG TCGTGCTCCT GGGCATGCCC 
GCCTTCATCC GCTACCTGCA GTCCAAGCGC TACGGGCAGT ACATCCGGGA CGACGGGCCC
ACCTCGCACC ACGTGAAGCT CGGCACGCCC ACCATGGGCG GGTTCGTGAT CGTGGTCGCC
GCGGTCCTGG GCTACGTCGC GGCCCTGCTG GCCCGGTGGG AACCGCCGTC CTGGACGGGA
GTGCTGCTCA TGTTCCTCAT GGTCGGCATG GGCGCCATCG GGTTCGCCGA CGACTACCTG
AAGATCGCGC GCAAGCACAA CCTGGGCCTG ACCTCGGTGC AGAAGCTCAT CGCCCAGTTC
ACCGTGGCCA CCGTGTTCGC GGTGCTGGCG CTGCAGTTCC CCAACGCCGA CGGGGCCACC
CCGGCGAGCA CCGCCATCTC GTGGGTGCGC GACACCCCCT TCGACCTGGC TGCCGCCGGC
GCCGTCGGCG GGGTGCTGCT CTTCGTGCTG TGGGCCGGGC TGATCATCGC CGGCATGTCC
AACGGCACCA ACCTCACCGA CGGACTGGAC GGGCTGCTGA CCGGTCTGGC AGCCATCGTC
TTCGCCGCCT ACACCCTCAT CGCGTTCTTC CAGTTCTCCC AGAACTGCTC GATGGTGGAC
ACCGGGGCCT GCTACACCGT CCGCGACCCG CTGGACGTCG CGGTCATCTG CGCCTCGGTG
GCCGGTGCCT GCATCGGCTT CCTGTGGTGG AACGCCTCCC CGGCCAAGAT CTTCATGGGT
GACACCGGGT CGCTGGCCCT GGGCGGGGCA CTGGCCGGCG TGGCCATCGT GACCCGCACC
GAGCTGCTGG TCGTCGTGAT CGCCGGTGTC TTCGTCATGG AGACCATCTC GGTCATGATC
CAGGTGGGCT CGTTCAAGTC CACCGGAAAG CGCGTGTTCA AGATGACCCC CATCCACCAC
CACTTCGAGA TGCTCGGCTG GCCCGAGGTG AACGTCGTGA TCCGCTTCTG GATCCTCGGC
GGCCTGTTCG TCGGCGCCGG CATGGCGTTG TTCTACACCG ACTGGCTGGT GCGCTGA
 
Protein sequence
MIGVVVGAAV SLLVVLLGMP AFIRYLQSKR YGQYIRDDGP TSHHVKLGTP TMGGFVIVVA 
AVLGYVAALL ARWEPPSWTG VLLMFLMVGM GAIGFADDYL KIARKHNLGL TSVQKLIAQF
TVATVFAVLA LQFPNADGAT PASTAISWVR DTPFDLAAAG AVGGVLLFVL WAGLIIAGMS
NGTNLTDGLD GLLTGLAAIV FAAYTLIAFF QFSQNCSMVD TGACYTVRDP LDVAVICASV
AGACIGFLWW NASPAKIFMG DTGSLALGGA LAGVAIVTRT ELLVVVIAGV FVMETISVMI
QVGSFKSTGK RVFKMTPIHH HFEMLGWPEV NVVIRFWILG GLFVGAGMAL FYTDWLVR