| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_16450 |
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| Symbol | dnaE |
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| ID | 8373151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 1694437 |
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| End bp | 1697988 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644991913 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_003149425 |
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| Protein GI | 256825465 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0617237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC CTGGGTCTGC TGAGAACTTC GTCCACCTGC ACAACCACAC CGAGTACTCG
ATGCTGGACG GTGCAGCGCG CATCGACGAC ATGTTCACCG TCGCCGACGA GATGGGCATG
CCCGCCATCG CCAGCACCGA CCACGGGTCG GTCTTCGGGG CCTACGAGTT CTGGTCGAAG
TCGCGGAAGT TCGAGACCAA GCCGATCGTC GGTGTGGAGG CCTACCTCAC CCCCGGCACC
CACCGCACGG ACAAGACGCG GGTGAAGTTC GGCGACGGGG GCCGCAACGA CGTCTCCGGT
TCGGGCGCCT ACACCCACAT GACGATGTGG GCCGAGACCA CCGAGGGCAT GCACAACCTC
TTCCGGGCGT CCTCGCTGGC CTCCATCGAG GGCTTCTACT TCAAGCCGCG CATGGACCGC
GAGCTGTTGG ACCGCTACGG CAAGGGGATC ATCGCCACCA CGGGGTGCCC GTCCGGTGAG
GTGCAGACCC GGCTGCGGCT GGGGCAGTAC GACAAGGCCA AGGAGGCCGC GGCCGAGTTC
CGGGACATCT TCGGCAAGGA CAACTTCTTC TGCGAGCTGA TGGACCACGG GCTCGACATC
GAGCGCCAGG TCCGGGCCGA CCTGCTGAAG CTCGCCAAGG AACTCGACCT GCCGCTGGTG
GCCACCAACG ACCTGCACTA CACGCACAAG GAGGACGCCA AGGCCCACGG TGCCCTGCTG
TGCGTGCAGT CCGGGTCGAC GCTGATGGAC CCCAACCGGT TCAAGTTCGA CAGCGACGAG
TTCTACCTGA AGTCGGCCGC TGAGATGCGC CACCTGTGGC GCGAGGTGCC CGAGGCCTGC
GACAACACGC TGCTCATCGC CGAGCGGTGC AACGTCGAGT TCACCGAGGG CGAGGGCCGG
TACATGCCGC GCTTCCCCTG CCCCGACGGC CACGACGAGA CCAGCTGGTT CATCTCCGAG
GTGCAGACCG GGCTGGCCCG TCGCTTCCCC GAGGGGGTGC CGGACTACGC GCTGAAGCAG
GCCGCCTACG AGCAGGACGT CATCATCAAC AAGGGGTACC CGGGGTACTT CCTGGTGGTC
GCGGACTTCA TCAACTGGGC CAAGGAGAAC GGCATCCGGG TCGGGCCGGG CCGTGGCTCG
GGTGCGGGGT CCATGTGCGC GTACGCGATG GGGATCACCG ACCTCGACCC CATCCCGCAC
GGACTGATCT TCGAGCGCTT CCTCAACCCC GAGCGCGCCT CGATGCCGGA CTTCGACGTC
GACTTCGACG AACGCCGTCG CCCCGAGGTC ATCAAGTACG TCACCGAGAA GTACGGCAGC
GACCGCGTGG CCATGATCGT CACCTACGGC ACCATCAAGG CCAAGCAGGC CCTGAAGGAC
GCCTCCCGCG TGATGGGCTT CCCGTTCGCC ACCGGGGAGA AGCTCACCAA GGCCATGCCC
CCGGCGGTGA TGGGCAAGGA CATCCCGCTG TCGGGGATCT TCGACGAGAA GCACCCGCGC
TACGCCGAGG CCATCGACTT CCGCGAGCTG CACGCCAACG ACCCCGAGGC CCGCGAGGTG
TTCGACACCG CGGTGGGGCT GGAGGGGCTG AAGCGCCAGT GGGGGGTACA CGCGGCCGGC
GTCATCATGG CCAGCGAGCC CCTCATCGAC CTCATCCCGA TCATGCGGCG CGAGGCCGAC
GGCCAGATCA TCACGCAGTT CGACTACCCC AGCTGCGAGA CGCTCGGCCT GGTCAAGATG
GACTTCCTGG GCCTGCGCAA CCTCACGATC CTCGATGACG CGATCGCCAA CATCGAGATG
AACCGCGAGG AGACGATCGA CCTCGATGCC CTGAGCAAGG ACATGACCGA CCCGGCGGCC
TACAAGCTGC TGGCGCGCGG TGACACCCTC GGTGTGTTCC AGCTCGACGG CGGCGGCATG
CGCTCGCTGC TGCGGCTCAT GCAGCCGGAC AACTTCGAGG ACATCTCCGC CGCCCTCGCG
CTGTACCGCC CCGGCCCGAT GGGGGCCAAC GCCCACACCA ACTTCGCGCT GCGCAAGAAC
GGCAAGCAGC CGGTGGACTA CATCCACCCG GAGCTCACCG AGGCGCTCGA ACCGATCCTG
AAGATGACCT ACGGGCTGAT CATCTACCAG GAGCAGGTCA TGGAGATCGC GCAGAAGCTG
GCCGGGTACA CGCTCGGCAA CGCCGACCTG CTGCGTCGCG CGATGGGCAA GAAGAAGAAG
GAGGTGCTGG ACGCCGAGTA CGTGAACTTC GAGGCCGGCA TGCTCGCCAA CGGCTACTCC
AAGGACGCGG TGGAGACGCT CTGGGGCATC CTGCTGCCCT TCAGCGACTA CGCGTTCAAC
AAGGCCCACA CCGCGGCCTA CGGCGTGGTC TCCTACTGGA CGGCCTACCT CAAGGCCAAC
TACCGGGCCG AGTACATGGC CGCCCTGCTC ACCAGCGTGC GCGACGACAA GGACAAGTCC
GCGCTCTACC TGGGGGAGTG CCGCCGCATG GGCATCAAGG TGCTCCCGCC GGACGTCAAC
GAGTCCATCG CGAACTTCGC GGCCGTCGGG CAGGACATCC GCTTCGGGCT GGAGGCCATC
CGCAACGTCG GCGGCAACGT GGTGCGCGCC ATCGTGGCCA CGCGCGAGGA GAAGGGGAAG
TTCACCTCCT TCGAGGACTT CCTGCGCAAG TGCCCTGCGG TGGTGTGCAA CAAGCGCACC
ATCGACTCCC TCATCAAGGC CGGGGCGTTC GACGACCTGG GCCACCAGCG GCAGGCCCTG
GCGACCGTGC ACGAGGCCTA CGTCGACGCG CTGGTGGGGG AGAAGAAGGA GCAGGAGCGC
GGCCAGGAGT CGCTGTTCGC CTCGCTGATG GGGGACGGCG GCGACGACGC CTCCAGCATC
GGCGGCATGC CCGCGATCCC GGACCTGGAG TGGGACAAGC AGACCCTGCT GGCCTTCGAG
CGGGAGATGC TGGGTTTGTA CGTCTCGGAC CACCCGCTGT TCGGCATCGA GCACGCCCTG
AGCCGGGCGA GCGACACCAG CATCGCCCAC CTGAACTCCG AGGACGGCCG GCCTGACGGG
GCGGAGGTCA CCATCGCCGG GCTGATCACG CAGGTGGTCA CCAAGCGTAA CAAGCGGGGT
GAACTGTGGG CGATCGCGAC GGTGGAGGAC CTCGAGGGGT CCATCGAGTG CCTGTTCTTC
GCGCGCACCT ACATGACCGT CTCCACGATG CTGACGCAGG ACGTCGTCTG CGTGGTCAGC
GGGCGCGTGA AGCGCGGGGA CGATGCGGTG TCGATCTTCG CCAGCGACCT GCGCCTGCCG
GACCTCGACG ACGGACCCCG GGGCCCGGTG ATGATCCACA TGGCCATGAA CCAGACCACC
GACGCGGTGG TCGGCAAGCT GCGCAACGTG CTCTCGGACC ACCCCGGGCC CACCGAGGTG
CAGATCCACC TCACCCAGCC CGGTCGGCGC GTGGTCATGC GGGTGGAGGA CAGCCTCCGC
GTGGAGGCGA GCAACTCCCT CTTCGGTGAC CTCAAGCAGC TCCTGGGCCC GAACTGCCTG
CCGGTGGCCT GA
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| Protein sequence | MSAPGSAENF VHLHNHTEYS MLDGAARIDD MFTVADEMGM PAIASTDHGS VFGAYEFWSK
SRKFETKPIV GVEAYLTPGT HRTDKTRVKF GDGGRNDVSG SGAYTHMTMW AETTEGMHNL
FRASSLASIE GFYFKPRMDR ELLDRYGKGI IATTGCPSGE VQTRLRLGQY DKAKEAAAEF
RDIFGKDNFF CELMDHGLDI ERQVRADLLK LAKELDLPLV ATNDLHYTHK EDAKAHGALL
CVQSGSTLMD PNRFKFDSDE FYLKSAAEMR HLWREVPEAC DNTLLIAERC NVEFTEGEGR
YMPRFPCPDG HDETSWFISE VQTGLARRFP EGVPDYALKQ AAYEQDVIIN KGYPGYFLVV
ADFINWAKEN GIRVGPGRGS GAGSMCAYAM GITDLDPIPH GLIFERFLNP ERASMPDFDV
DFDERRRPEV IKYVTEKYGS DRVAMIVTYG TIKAKQALKD ASRVMGFPFA TGEKLTKAMP
PAVMGKDIPL SGIFDEKHPR YAEAIDFREL HANDPEAREV FDTAVGLEGL KRQWGVHAAG
VIMASEPLID LIPIMRREAD GQIITQFDYP SCETLGLVKM DFLGLRNLTI LDDAIANIEM
NREETIDLDA LSKDMTDPAA YKLLARGDTL GVFQLDGGGM RSLLRLMQPD NFEDISAALA
LYRPGPMGAN AHTNFALRKN GKQPVDYIHP ELTEALEPIL KMTYGLIIYQ EQVMEIAQKL
AGYTLGNADL LRRAMGKKKK EVLDAEYVNF EAGMLANGYS KDAVETLWGI LLPFSDYAFN
KAHTAAYGVV SYWTAYLKAN YRAEYMAALL TSVRDDKDKS ALYLGECRRM GIKVLPPDVN
ESIANFAAVG QDIRFGLEAI RNVGGNVVRA IVATREEKGK FTSFEDFLRK CPAVVCNKRT
IDSLIKAGAF DDLGHQRQAL ATVHEAYVDA LVGEKKEQER GQESLFASLM GDGGDDASSI
GGMPAIPDLE WDKQTLLAFE REMLGLYVSD HPLFGIEHAL SRASDTSIAH LNSEDGRPDG
AEVTIAGLIT QVVTKRNKRG ELWAIATVED LEGSIECLFF ARTYMTVSTM LTQDVVCVVS
GRVKRGDDAV SIFASDLRLP DLDDGPRGPV MIHMAMNQTT DAVVGKLRNV LSDHPGPTEV
QIHLTQPGRR VVMRVEDSLR VEASNSLFGD LKQLLGPNCL PVA
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