Gene Ksed_16380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_16380 
Symbol 
ID8373144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1686323 
End bp1687345 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content68% 
IMG OID644991906 
Productlipoyl synthase 
Protein accessionYP_003149418 
Protein GI256825458 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0443181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.259676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATCG CCCCCGAGGG TCGCCGTCTG CTGCGCGTCG AGGCGCGCAA CGCCGAGACG 
CCGATCGAGC GCAAGCCCGA GTGGATCCGG ACCACCGCCA AGATGGGACC GGAGTACCGC
GAAGTGAACT CGATGGTGAA GGGCCAGGGC CTGCACACCG TGTGCCAGGA GGCCGGCTGT
CCCAACATCT TTGAGTGCTG GGAGGACCGC GAGGCCACCT TCCTCATCGG TGGTGACACC
TGCACCCGCC GCTGCGACTT CTGCGACATC GCCACCGGCA AGCCCCAGGC GCTGGACCCG
ATGGAGCCGC TGAAGGTCGC GAACTCCGTG GCCCAGATGG GGCTGCGCTA CGCCACCGTC
ACCGGTGTGG CCCGCGACGA CATGCCCGAT GGCGCCGCCA CCCTGTACGC CGACACGATC
CGCGCCATCC ACGAGCGCAA CCCGAACACG GGCGTGGAGA TCCTGCCGCC GGACTTCGGT
GCCAAGCCCG AACTCGTCCA GAAGGTGTTC GACGCCCGCC CCGAGGTGTT CGCCCACAAC
TTGGAGACGG TGCCGCGCAT CTTCCGCCAG ATCCGCCCGG CCTTCACCTA CGAGAAGTCC
CTCAAGGTCA TCTCCATGGC CAAGGAGGAC GGTCTGCTCA CGAAGTCGAA CCTCATCCTG
GGCATGGGCG AGGACGACGA GGAGATCCGC CAGGCGATGC GGGACCTGCG CGACGCCGGG
TGCGACATCC TGACGATCAC GCAGTACCTG CGGCCCTCGA AGCTGCACCA CCCCATCGAC
CGGTGGGTGA AGCCCGAGGA GTTCGTCGCC CACAGCGAGT ACGGTGAGTC CCTGGGCATG
AGCATCATGG CCGGACCGCT GGTGCGCTCT TCCTACCGTG CGGGACGCCT CTGGGCCCAG
ACCATGAAGA AGCTGGGCCG CGAGATCCCG GAGCACCTCT CCCACCTGGG TGAGGCCGCC
GACGACGGCG CCCGCCAGGA GGCCCGCACG CTCGTGGAGA AGCGTCTGAG CGCGTCCGCC
TGA
 
Protein sequence
MTIAPEGRRL LRVEARNAET PIERKPEWIR TTAKMGPEYR EVNSMVKGQG LHTVCQEAGC 
PNIFECWEDR EATFLIGGDT CTRRCDFCDI ATGKPQALDP MEPLKVANSV AQMGLRYATV
TGVARDDMPD GAATLYADTI RAIHERNPNT GVEILPPDFG AKPELVQKVF DARPEVFAHN
LETVPRIFRQ IRPAFTYEKS LKVISMAKED GLLTKSNLIL GMGEDDEEIR QAMRDLRDAG
CDILTITQYL RPSKLHHPID RWVKPEEFVA HSEYGESLGM SIMAGPLVRS SYRAGRLWAQ
TMKKLGREIP EHLSHLGEAA DDGARQEART LVEKRLSASA