| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_16350 |
|---|
| Symbol | |
|---|
| ID | 8373141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 1682047 |
|---|
| End bp | 1683948 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644991903 |
|---|
| Product | 2-oxoglutarate dehydrogenase E2 component |
|---|
| Protein accession | YP_003149415 |
|---|
| Protein GI | 256825455 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.229693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.361221 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA AGGTGACGAT GCCGGAGCTC GGCGAGTCCG TGACCGAGGG CACGGTGACC
CGCTGGCTGA AGGGCGTTGG TGACGAGGTT GCGGTCGACG AGCCGCTGCT CGAGGTCTCC
ACCGACAAGG TGGACACCGA GATCCCCTCC CCGGTGGCGG GAGTGCTGCA GGAGATCCTC
GCCGAGGAGG ACGACACGGT CGAGGTCGGT GGCGACCTGG CCGTCATCGG CGACGACGAG
GGTGGCTCGT CCGACGACTC GGGTGACTCC GAGGAGGACA GCGAGCCCGC CGAGGACGAG
AAGGCCGAGG AGGAGCCCGC GCAGGACGAG GAGTCCGAGG AGCCGGCGCA GGACGAGGAG
GCCCAGGACG ACTCCGCGGA CGAGAAGCCG AAGAAGTCCT CCGGTGGTGG CGGCGGCGAG
GGCCAGACCG TCACGATGCC GGAGCTCGGC GAGTCCGTGA CCGAGGGCAC CGTCACCCGC
TGGCTGAAGG AGGAGGGCGA CGAGGTCGAG GTCGACGAGC CCCTGCTCGA GGTCTCCACC
GACAAGGTCG ACACCGAGAT CCCCTCCCCC TACGCGGGTG TGCTGTCCAA GATCATCGCC
GGCGAGGACG AGACCATCGA GGTCGGCGGC GAGCTCGGTG TGATCGGTGG CGAGGCCGGC
GGTGACGACG CGGGCGACTC CGAGGACGAG AAGCCGAAGG AGGAGGAGAA GGCCGAGGAG
AAGGCCGCCG ACTCCTCCGA GGACGACTCG ATGGAGGCCG GGACCGCCGA GGAGGTGGCC
GCCGGCGCCG ACCAGGGTGG CGACGCCGAC GCGAAGGGCG AGCAGGAGAA GTCCGAGAAG
CCCGCCAAGG AAGAGCCGAA GAAGGAGGAG AAGCCCGCCA AGGACCAGAA GTCCGAGGAC
AAGGACTCCT CCGGTTCCGA CACCTACGTG ACCCCCTTGG TGCGCAAGCT GGCCAAGCAG
CACGGCGTGG ACCTCTCCAG CCTGGAGGGT TCCGGCGTGG GTGGCCGCAT CCGCAAGCAG
GACGTGCTGG CCGCTGCCGA GGGCAAGGAC TCCGCAAAGG CCGAGGAGCC CGCCGCCGAG
GAGAAGCCCG CTGCGGAGAA GGCGTCCGCC GAGGGCAAGG ACTCCGCGAA GTCCGGGTCC
AAGGACTCCG GCGCTCCGGC GAAGTCCTCC GGTGGGGCCC TGGAGGGCCT GCAGGCCAAG
CGCGGCACCA CCGAGAAGAT GAGCCGGCTG CGCAAGGTCA TCGCCCAGCG CATGATGGAG
TCGCTGCAGG TCTCGGCGCA GCTCACCACC GTGGTCGAGG TGGACGTCAC CAAGATCGCC
CGACTGCGTG ACCGCACGAA GAAGGACTTC CAGGCGCGCG AGGGCGTGAA GCTCTCTTTC
CTGCCCTTCT TCGCGCAGGC CGCCATCGAG GCGCTCAAGG AGCACCCGAC GGTGAACGCC
AGCCTGGAGG GCGACGAGAT CATCTACCAC GCCCAGGAGA ACCTGGGTAT GGCCGTCGAC
ACCGAGAAGG GCCTGCTGGT CCCGGTCATC AAGGACGCCG GTTCGCTGAA CATCGCCGGC
ATCGCCCGCA AGATCGACGA CCTGGCCACC CGCACCCGCG ACAACAAGGT GGGCCCGGAC
GAGCTGAGCG GCGCGACCTT CACGCTGACC AACACCGGTT CGCGCGGGGC GCTGTTCGAC
ACGCCGATCA TCAACCAACC GAACGTGGCG ATCCTCGGCA CCGGTGCCGT GGTGAAGCGT
CCGGTCGTGG TGAGCGACGA GGACGGCCTG GAGACCATCG CCATTCGCTC GATGGTGTAC
CTGGCCCTGT CCTACGACCA CCGCATCGTG GACGGCGCCG ACGCCGCGCG CTTCCTGGGC
ACCATGAAGG AGCGTCTGGA GAGCGGTCAG TTCGACGTCT GA
|
|---|
| Protein sequence | MSEKVTMPEL GESVTEGTVT RWLKGVGDEV AVDEPLLEVS TDKVDTEIPS PVAGVLQEIL
AEEDDTVEVG GDLAVIGDDE GGSSDDSGDS EEDSEPAEDE KAEEEPAQDE ESEEPAQDEE
AQDDSADEKP KKSSGGGGGE GQTVTMPELG ESVTEGTVTR WLKEEGDEVE VDEPLLEVST
DKVDTEIPSP YAGVLSKIIA GEDETIEVGG ELGVIGGEAG GDDAGDSEDE KPKEEEKAEE
KAADSSEDDS MEAGTAEEVA AGADQGGDAD AKGEQEKSEK PAKEEPKKEE KPAKDQKSED
KDSSGSDTYV TPLVRKLAKQ HGVDLSSLEG SGVGGRIRKQ DVLAAAEGKD SAKAEEPAAE
EKPAAEKASA EGKDSAKSGS KDSGAPAKSS GGALEGLQAK RGTTEKMSRL RKVIAQRMME
SLQVSAQLTT VVEVDVTKIA RLRDRTKKDF QAREGVKLSF LPFFAQAAIE ALKEHPTVNA
SLEGDEIIYH AQENLGMAVD TEKGLLVPVI KDAGSLNIAG IARKIDDLAT RTRDNKVGPD
ELSGATFTLT NTGSRGALFD TPIINQPNVA ILGTGAVVKR PVVVSDEDGL ETIAIRSMVY
LALSYDHRIV DGADAARFLG TMKERLESGQ FDV
|
|---|
| |