Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_16040 |
Symbol | |
ID | 8373110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 1649504 |
End bp | 1653286 |
Gene Length | 3783 bp |
Protein Length | 1260 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644991872 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_003149384 |
Protein GI | 256825424 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.390717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0575947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCGCG CAGGGGCGGT GATGAGCGCT GACTTCGCCC ACCTGCACGT GGCCTCCAGC TTCTCGTTGC AGTACGGGAC CTCCCGGCCG CAGGAGCTCG TGGACCGTGC AGCGGCGTGG GGGCAGTCCC ACCTCGCCCT GACCGACCGC GATGGTCTCT ACGGGGCGGT GCGCTTCACC CGGGCCTGTG TGGAGGCCGG GATCGTGCCG GTGGTGGGGG TCGACCTCGC CGTGGCCCAC GACGCGCCGG CCGGCCCGCC GGCCGCGCGG AGAGCCGGCC GGCGGCAGCA GCCCGTCCGG GGCGGCTCCT GGGTGGACGA GAGCCACTGT CGGGTGCGGG TGCTGGCCGC CGGGCGTGCA GCGGGGCACG GGAACGGTGT GGGGTGGGCG GCGCTGTGCC GGCTGGTCTC CCACACCCAC GCGGCGGGGG AGCGGGGTGA GCCCCGCACC ACCCGGGCGC TGGTGGCCGG TGCTGCTCCC GCGGTCCGGG TGCTGCTGGG GCCGGACTCC GACGTGGGGC AGGCGGTCCT GCAGCGTCGC CGGTCCGAGG CCAGGCGGTT GCTGCACGGG TGGGTGGAGG CGGTGGCCGA GCAGGTGGGC GGGACCGCTG CCGCCCGTCG GGTGGTGGTG GTCGAGCTGG TGTGCAGCGG GGCGCCGGCT GGTTCCCCGG GGTGCACAGA GCAGGCCGTG CGCATGTGGC AGCTGGCGCA GGAGGTCGGG GTGCGCGCGG TGCTGACCGC CGCGGTCCGG CACGCCGACC CCGAGGGCGT GGTGGTGGCC GACGTGCTGG ACGCCGCCCG TCAGCACGTG CTGCTCGACC CCCGCCACCT CGACCAGCGC ACCTCCGCGG CCCACCTGGC CTCGACGGCC AGCATGGTCC GCGTGGCCCA CTGGCTGGCC GAGCGGGCCG GCCAGCCACC GCGGGTCGCC GACCAGCTGC TGGCCGCGAC CTCGGGGGTG GCAGCCGAGT GCGGGCTCTC CGCCCGGGAC GACCTCGGGA TCGGGTCGGT GCACCTGCCC GAGCCCGAGG TGCTCGGGTT CACCGACACC GCCGACGCCC TACGTGGCCT GACCGCGCGG TGCCGCGGGG CGGTCGACGA GATGTACCGG GGCGCAGCAC TGCGGCGCCG TGCCCGGGAG CGGATGGAGG CCGAGCTGGC CACCATCGAG CAGTTGGGCT ACCCGACCTA CTTCCTGACC GTGGCCCGGG TGTGCGACCT GATCCGCGAG GTGGGGGGTC GCGTGGCGGC CCGGGGCTCC GGCGCCGGGT CCCTGGTGAA CCACCTGCTG GGGATCAGTC GGGTGGACCC GTTGCGGCAC GACCTGCTGA TGGAGCGCTT CTGCTCGCCG CTGCGGGCCG AGCTGCCGGA CATCGACATC GACGTGGAGT CGGCGCGCCG CCCCGAGATC TACGAACGCA TCCTGGAGCG GTTCGGAGCG GGACGGGTGA CCTGCGTGTC CATGATGGAG ACCTACCGGG TGCGGCACGC CGTCCGGGAC GTGGGGGCGG TGCTGGGCAT GCCACCGGTG GAGGTGGACG CCATCGCCAA GGCCTTCCCC CACGTGCGCG CCCGGGACGC CCGCGCCGCC ATCCGGGACC TGCCCGAGCT GCGGGCCGCC GGGTTGGACG CCCCCCGCCT GCAGCGGATG TTCGACCTCG TGGAGCGCCT GGACGGCCTG CCGCGCCACA TCGCCCTGCA CCCGTGCGGG GTGGTGCTGT CGAACCTGGG CCTGCGCGAC CGCACGCCGG TGGAGGAGAG CTGGATCGGT TTCCCGATGA GCCAGTTCGA CAAGGACGAC GTGGAGGACA TGGGGCTGCT CAAGCTGGAC GTCCTGGGCA TCCGCATGCA GTCGGCGATG GCGCACACCG TGGACCTGGT GGAGTCCACC CACGGGGTCC GCCTCGACCT GGACGACGAG GAGCAGGTGC CGCACGACGA CGCCGAGACC TTCGGGCTGA TCGGGTCGAC CCGCACCCTG GGCTGCTTCC AGATCGAGTC CCCCGGGCAG CGGGAGCTGG TTGGCAAGTT CGGCCCACAG ACCTTCGAGG ACATCATCAT CGACATCTCG CTGTTCCGTC CCGGGCCGGT GAAGTCGGAC ATGATCACCC CCTTCCTGTC GGCGCGGCAG GGGTGGGCGG AGCCACTGCT CATGCACCCG GCGCTCGAGG AGCACCTGCG CAGCACCGAG GGGGTGGTGG TCTTCCACGA GCAGGTGCTG CAGATCATCA CCGCCACCAC CGGGGTGAGC CTGGCCCACT CGGACGAGGC GCGCCGGGCC ATGGGATCGC CCGACGGGCG GGACGCCGTG GAACGGTGGT GGCGCCCGGC GGCCGCCGCC CGCGGTTTCA CCGGGGAGGT GGCCGACCGC ATCTGGGAGG TGCTGGCAGC CTTCGCCTCC TTCGGGTTCT GCAAGGCCCA CGCGGCCGCC TTCGCCCTGC CCACCTACCA GTCGGCCTGG TTGAAGACCC ACTACCCGGC GCACTTCATG GCGGGGGTGC TGACCCACGA CCCCGGCATG TACCCCAAGC GGTTGATCAT GGACGACGCC CGGGAGCTGG GCGTCGAGAT CCTGGGCCTG GACGTGAACG CCTCCGGTGA GGGCTACCGG GTGGAGCGGG TCGCCGACTC GTCCGGCCCG GGAGAGTGGC CGGCCTCGGC GGGCCCGGGC GCGCCCGACC CCGACCTGGC CCTCGACCGG GTGCGGCAGC GGGCACGGCA GTGGGGCGTG CGGATCGCGC TGACCGAGGT GAAGGGACTG GGCGAGGACG ATGCCCGACG CATCGTGGAG GGGCAGCCGT ACAGCTCGTT GGCCGACTTT TGGCAGCGGG CGCAGGTGGA CCGCCCCCTG GTGGAGCGCA TGGTCCTGGC TGGTGCCTTC GACGCCTTCG CGTCCCCGGC GCGCCGCCGC GACCTGCTGG TGGAGCTGAT GGACCTCGAG CGGTGGCGCG ACCCCCGGCC CCGCGGCAAG CGCGCCCGCC TGGCCGGGGA ACGGGCCGAA CAGGACCGCC GGCGCCGCGC CGGTCACGGT ACCCAGCAGG TCCTGGAGCT CGGCGTTCCC CGGGCCGTCG ACGCCACCGG GCTGCCACCG ATGGCGCTGG AGGAGCAGGT GGCCCACGAG CTGGACGTCC TGGGCATGGA CGTCACGGCC CACGTGCTCG AACCGCACCT GCCCACCCTG CGGGAGCTGG GCGTCACGCC GGCCCGGGAC GTCCGGACCA TGCGGTCCGG GGCGGAGGTC CTGGTGGCCG GGGTGCGGGT GGCCACCCAG ACTCCTCCGG TCCGGTCGGG ACGGCGGGTG GTCTTCGTGA CCCTCAACGA CCCCACCGGT GCCAGCGACG CGACCTTCTT CGAGGACGTC CAGGGCCCCT ACGCCACGGT GCTCTTCCAG TCCTGGTTCC TGCTGGTGCG TGGCGTCGTG CGCCGGACCG GCCCCCGGGG GGTGTCGCTG CGGGCCACCG GGGCCTGGGA GCTCTCGGGG CTCACCGAGG CTCACCGGGC GGGGGGAGCC AGTGGGCTGT TCACCGCGTG GGAGGAGGCC GACCGGGTGC AGCACGAGCG CAGCGAGGCG GGACAGGCTG CGGCACGTGC GGTACGGGCA GAGGGACAGG AGGCTCCGGA GGGCCGGAGG GTGCTGGTGC ACGCCTCGGG GTACCGCCAG TCGCCCTACG CGGACGTCGG CGCAGCCGGA CCGGCCGTGG CGAGTGGCCG CGTGCTGGGT GCGGGCGGCG GAGTGCCCTC GCGCAAGCTC TGGCACAGCT CGCCGGGGAG CTCGGGGTGG TGA
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Protein sequence | MARAGAVMSA DFAHLHVASS FSLQYGTSRP QELVDRAAAW GQSHLALTDR DGLYGAVRFT RACVEAGIVP VVGVDLAVAH DAPAGPPAAR RAGRRQQPVR GGSWVDESHC RVRVLAAGRA AGHGNGVGWA ALCRLVSHTH AAGERGEPRT TRALVAGAAP AVRVLLGPDS DVGQAVLQRR RSEARRLLHG WVEAVAEQVG GTAAARRVVV VELVCSGAPA GSPGCTEQAV RMWQLAQEVG VRAVLTAAVR HADPEGVVVA DVLDAARQHV LLDPRHLDQR TSAAHLASTA SMVRVAHWLA ERAGQPPRVA DQLLAATSGV AAECGLSARD DLGIGSVHLP EPEVLGFTDT ADALRGLTAR CRGAVDEMYR GAALRRRARE RMEAELATIE QLGYPTYFLT VARVCDLIRE VGGRVAARGS GAGSLVNHLL GISRVDPLRH DLLMERFCSP LRAELPDIDI DVESARRPEI YERILERFGA GRVTCVSMME TYRVRHAVRD VGAVLGMPPV EVDAIAKAFP HVRARDARAA IRDLPELRAA GLDAPRLQRM FDLVERLDGL PRHIALHPCG VVLSNLGLRD RTPVEESWIG FPMSQFDKDD VEDMGLLKLD VLGIRMQSAM AHTVDLVEST HGVRLDLDDE EQVPHDDAET FGLIGSTRTL GCFQIESPGQ RELVGKFGPQ TFEDIIIDIS LFRPGPVKSD MITPFLSARQ GWAEPLLMHP ALEEHLRSTE GVVVFHEQVL QIITATTGVS LAHSDEARRA MGSPDGRDAV ERWWRPAAAA RGFTGEVADR IWEVLAAFAS FGFCKAHAAA FALPTYQSAW LKTHYPAHFM AGVLTHDPGM YPKRLIMDDA RELGVEILGL DVNASGEGYR VERVADSSGP GEWPASAGPG APDPDLALDR VRQRARQWGV RIALTEVKGL GEDDARRIVE GQPYSSLADF WQRAQVDRPL VERMVLAGAF DAFASPARRR DLLVELMDLE RWRDPRPRGK RARLAGERAE QDRRRRAGHG TQQVLELGVP RAVDATGLPP MALEEQVAHE LDVLGMDVTA HVLEPHLPTL RELGVTPARD VRTMRSGAEV LVAGVRVATQ TPPVRSGRRV VFVTLNDPTG ASDATFFEDV QGPYATVLFQ SWFLLVRGVV RRTGPRGVSL RATGAWELSG LTEAHRAGGA SGLFTAWEEA DRVQHERSEA GQAAARAVRA EGQEAPEGRR VLVHASGYRQ SPYADVGAAG PAVASGRVLG AGGGVPSRKL WHSSPGSSGW
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