Gene Ksed_15980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15980 
Symbol 
ID8373104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1643042 
End bp1644427 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content67% 
IMG OID644991866 
Productamino acid transporter 
Protein accessionYP_003149378 
Protein GI256825418 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.133211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0674026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACCG AGCTCAAGCG GGTCCTCGGG CCGAAGCTGC TCCTGCTGTT CATCATCGGA 
GACATCCTCG GAACCGGCAT CTACGCGATC ACCGGCAAGG TGGCCGGCGA GGTCGGCGGT
GCCGTGTGGG TGCCGTTCGT CATCGCCTTC ACCATCGCGA TCATCACCGC CTTCGCGTAC
TTGGAGCTGA TCACCAAGTA CCCGCACGCC GGTGGTGCCG CCAACTTCAT CCACAAGGCC
TTCGGTCTGC AGTTCGTGAC CTTCATGGTC ACCTTCACGG TGATGGCCTC GGGTATCACC
TCGGCCGCCA CGGCCGCCAA GGCCTTCGCC TCGAACCTGG TGGCCGGTGT CGGCCTCGAC
TGGGCTCCGG AGGGGGCCGC GGTGCTGGGC ATCGCGGTGG CCTTCATGAT CGTCGTGGCC
CTGGTGAACT TCCGCGGCGT GGCCGAGTCG GTCGGGCTCA ACGTGGTGCT CACCATCATC
GAGCTCACCG GTCTGATGCT GGTCATCTTC GTGGGCCTGT GGGCCGTGGC GGGCATGAGT
GACGCCCCGG TCGACTTCTC CCGCGCCATG ATGTTCGAGA CCAGCGGTGA CAAGAACGCC
TTCTTGGCCG CGACCGCCGG CACCTCGCTG GCGTTCTTCG CCATGGTGGG CTTCGAGGAC
TCGGTGAACA TGGCCGAGGA GACCAAGGAC CCGGTCAAGA CCTTCCCCAA GATCATGCTC
AGCGGTCTGG TCATCACCGC CATCATCTAC GTGCTGGTGT CGGTCACCGC CGTGGCGCTG
GTGCCGGTGG GACAGCTCAG CCAGGGCGAC ACCCCGCTGC TGCAGGTGGT GCAGGCCGGC
GCGCCGAACC TGCCGATCGA CACGATCTAC CCGTTCATCG CCATGTTCGC CGTGGCCAAC
ACCGCGGTGA TCAACATGCT GATGGCCTCC CGCCTGCTCT ACGGCATGGC CAAGCAGGAC
GTCCTGCCCC GCCCGCTGGC GCTGGTGCAC AAGGGTCGCC AGTCGCCGTG GGTGGCGATC
ATCGTCACCA CCGCCCTGGC TGTAGGCCTC ATCCTGGTCG TGGGGCAGGT GACCGCGCTG
GGCGGCACCA CCGCGCTGCT GCTGCTGGCC GTGTTCGCCA TGGTGAACAT CGCCTGCATC
GTGCTGCGCA AGCGCGACCA CGAGGTGGAG CACAGGTACT TCAAGGCTCC CGGGTGGATC
CCGTGGGTCG GCGCGGTGCT GTGCCTGTAC ATGGTGGGTC CGTGGACCGG CCGTGACACC
GAGCAGTACG TGATCGCCGG CTGGTTGCTG CTGATCGCGG TGATCCTGTG GGCCCTGACC
TGGTTCCTCA ACCGGGCCCT GTACGCCAAG CCCACGCGGG TGCGCCACCC GGAGGACCTG
CGCTGA
 
Protein sequence
MDTELKRVLG PKLLLLFIIG DILGTGIYAI TGKVAGEVGG AVWVPFVIAF TIAIITAFAY 
LELITKYPHA GGAANFIHKA FGLQFVTFMV TFTVMASGIT SAATAAKAFA SNLVAGVGLD
WAPEGAAVLG IAVAFMIVVA LVNFRGVAES VGLNVVLTII ELTGLMLVIF VGLWAVAGMS
DAPVDFSRAM MFETSGDKNA FLAATAGTSL AFFAMVGFED SVNMAEETKD PVKTFPKIML
SGLVITAIIY VLVSVTAVAL VPVGQLSQGD TPLLQVVQAG APNLPIDTIY PFIAMFAVAN
TAVINMLMAS RLLYGMAKQD VLPRPLALVH KGRQSPWVAI IVTTALAVGL ILVVGQVTAL
GGTTALLLLA VFAMVNIACI VLRKRDHEVE HRYFKAPGWI PWVGAVLCLY MVGPWTGRDT
EQYVIAGWLL LIAVILWALT WFLNRALYAK PTRVRHPEDL R