Gene Ksed_15900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15900 
Symbol 
ID8373096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1634144 
End bp1636615 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content73% 
IMG OID644991858 
ProductDNA topoisomerase IV subunit A 
Protein accessionYP_003149370 
Protein GI256825410 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0201184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.219646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAAGA ACTCCAAGGA CCTCCAGACG CCCACGCAGG TGGCCGACAC GGTCATCGAC 
ATCGACGTCG AGGAGGAGAT GAGCTCGGCG TTCCTCGAGT ACGCCTACTC GGTCATCTAC
TCCCGCGCCC TGCCCGACGC CCGCGACGGC CTCAAGCCGG TGCAGCGCCG CATCCTGTTC
GGCATGGACG AGCTCGGCCT GCGCCCGGAC CGCGGGTACG TGAAGTCCTC CCGCGTGGTC
GGCGAGGTGA TGGGCAAGTA CCACCCGCAC GGTGACACCG CCATCTACGA CGCCCTGGTG
CGCCTGGCCC AGCCCTTCTC GATGCGGGTG CCCCTGGTGG ACGGCCACGG CAACTTCGGC
TCGCTGGACG ACGGGCCGGC CGCCAGCCGC TACACCGAGG CCCGCATGGC GCCGGCCGCG
CTGCTCATGA CGCAGACGCT GGACGAGGAC ACCGTCGACA TGGTGCCCAA CTACGACGAC
CAGCTGCTGC AGCCCGAGGT GCTCCCCGCG GCCTATCCCA ACCTGCTGGT CAACGGCGCC
AGCGGCATCG CGGTGGGCAT GGCCACCAAC ATCGCCCCCC ACAACATGGG TGAGGTGATC
GCCGCCGCCC GCCACCTGCT GGACAACCCG GGCGCCACCG TCGAGGACCT GATGCGCTTC
GTCCCCGGGC CGGACCTGCC CGGCGGCGGG CGCATCGTGG GCCTGGACGG CATCCGTGAC
GCCTACCGCA CCGGGCGCGG GTCCTTCCGC ACCCGGGCGA CGGTCCGCAT CGAGAACGTC
ACCCCCCGGC GCAAGGGGAT CGTGGTCACC GAGCTGCCCT ACCTGGTGGG GCCGGAGAAG
GTGATCGCCA AGCTCAAGAC GCAGGTGCAG GCCAAGAAGC TGCAGGGCAT CGCCGACGTC
AAGGACCTCA CCGATCGGCA CAAGGGACTG CAGCTGGTGA TCGAGGTGAA GAACGGCTTC
AACCCCGAGG CCGTGCTCGC CCAGCTGTAC AAGCAGACGC CGATGGAGGA GTCCTTCGGC
ATCAACAACG TCGCCCTGGT GGACGGCCAG CCGCGCACCC TGGGGCTGCG CGAGCTGCTG
GCCGTGTACG TCGACTTCCG GTGCGAGGTG GTGCGCCGCC GCACCGAGTT CCGCCTGCGC
AAGAGGCAGG AGCGCCTGCA CCTGGTGGAG GGCCTGCTGC TGGCGATCCT CGACATCGAC
GAGGTCATCC AGCTCATCCG CTCCTCGGAC GACACCGCCG AGGCCCGCAC GCGCCTGATG
CAGGTCTTCG ACCTCTCCGA GCTGCAGGCC AACTACATTC TGGAGCTGCA GCTGCGGCGC
CTGACGAAGT TCTCCCGCAT CGAGCTGGAG ACCGAGCGCG ACGACCTGCT GCGGGCGATC
GAGGAGCTGC AGGCAATCCT GGCCGACGAG GCGCTGCTGC GCCGCGTGGT GAGCGACGAG
CTGGCCGCCG TGGCCAAGGA GCACGCCACG CCCCGCCGCA CGGTGCTGCT GGAGAGCGAG
GCCGCCGCCG CGATGACGCC GGCCGCGCCG CTGGAGGTGG CCGACGACCC GGTGACCGTG
GTGCTCTCCG CGACGGGGCT GGTCGCCCGC GTGCCGCGGG GCGAGGACAC CCCATCGGTG
CTGTCGCGCG ACGACGTCCG CGCGGCCGGT GCGGGGCGCG TGGACCACGA CGCGCTCGCC
TCGGTGGTCG CCTCGACGGC GCGGGGCACG GTGGGTCTGG TGACCTCGAC CGGGCGTCTG
GTGCGCCTGT CGGTGGTGGA CCTCCCGGCG CTGCCCGGCT CGGACGCCCT GGGCATGGCA
GGTGGCGCAC CGCTGGCCGC GTTCACCGAG CTCGCCGGCG GGGAGCGACC GCTGGCGCTG
GTGCGCGTGG AGGGCGCGGA GGACTCCCCC GGGCTCGCCC TGGCCACCGC CGGCGGCGTG
GTCAAGCGGG TGCGCCCGGA CTACCCGGGC GGCAAGGACT CCTTCGAGGT CATCACCCTG
GCCGACGGGG ACGAGCTGGT GGGCGCGGTC GAGCTCGCCA CCGGCGAGGA GGACCTCGTG
TTCGTCACCG ATGCGGCCGC GCTGCTCACG TACTCCGCCT CGCTGGTGCG CCCGCAGGGC
CGCAGCGGGA GCGGGGTGGC CGGCATCAAG GTGCCCGAGG GACAGCGGGT GCTGGGCTTC
GCCGCGGTGC CCGCCGCATC GGAGGACGCG ATGGTGGTGA CGGTCGCCGG ATCATCCGGG
GCCCTGCCCG GGACCGATGC GGGGACCGTC AAGGTGACGC CGCTGTCCGC CTACCCCGCC
AAGGGACGCG CCACGGCCGG CGTCCGCTGC CACCGTCTGC TGAAGGGCGA GGACGGGCTG
ATGCTTGCCT GGGTTGGGGC CGACCCTCGG GCCGTTGACG CCACCGGCCG GGCCGTGGAG
CTGCCGGAGC CCACCGAGCG GCGGGACGGG TCCGGGACGG GTGTGAGCGC CCCCATCGCG
GCGATCGGCT GA
 
Protein sequence
MPKNSKDLQT PTQVADTVID IDVEEEMSSA FLEYAYSVIY SRALPDARDG LKPVQRRILF 
GMDELGLRPD RGYVKSSRVV GEVMGKYHPH GDTAIYDALV RLAQPFSMRV PLVDGHGNFG
SLDDGPAASR YTEARMAPAA LLMTQTLDED TVDMVPNYDD QLLQPEVLPA AYPNLLVNGA
SGIAVGMATN IAPHNMGEVI AAARHLLDNP GATVEDLMRF VPGPDLPGGG RIVGLDGIRD
AYRTGRGSFR TRATVRIENV TPRRKGIVVT ELPYLVGPEK VIAKLKTQVQ AKKLQGIADV
KDLTDRHKGL QLVIEVKNGF NPEAVLAQLY KQTPMEESFG INNVALVDGQ PRTLGLRELL
AVYVDFRCEV VRRRTEFRLR KRQERLHLVE GLLLAILDID EVIQLIRSSD DTAEARTRLM
QVFDLSELQA NYILELQLRR LTKFSRIELE TERDDLLRAI EELQAILADE ALLRRVVSDE
LAAVAKEHAT PRRTVLLESE AAAAMTPAAP LEVADDPVTV VLSATGLVAR VPRGEDTPSV
LSRDDVRAAG AGRVDHDALA SVVASTARGT VGLVTSTGRL VRLSVVDLPA LPGSDALGMA
GGAPLAAFTE LAGGERPLAL VRVEGAEDSP GLALATAGGV VKRVRPDYPG GKDSFEVITL
ADGDELVGAV ELATGEEDLV FVTDAAALLT YSASLVRPQG RSGSGVAGIK VPEGQRVLGF
AAVPAASEDA MVVTVAGSSG ALPGTDAGTV KVTPLSAYPA KGRATAGVRC HRLLKGEDGL
MLAWVGADPR AVDATGRAVE LPEPTERRDG SGTGVSAPIA AIG