| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_15720 |
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| Symbol | |
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| ID | 8373078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 1611332 |
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| End bp | 1613188 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644991840 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_003149352 |
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| Protein GI | 256825392 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.663127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGT TGGACCACAT TGGCGACCCG AGCGACCTCA GGGCCCTGGC AGCGGACCGC
CTGCCGGCCC TCGCTCAGGA CATCCGCACC CGCCTCATCG AGAGCGTGTC CCGCACCGGC
GGGCACCTTG GCCCGAACCT CGGGGTGGTG GAGCTGACGA TCGCGCTGCA TCGCGTCTTC
GAGTCCCCGC GCGAGGCGAT CGTCTTCGAC ACCGGGCACC AGAGCTACGT GCACAAGATG
CTCACCGGGC GCACCGACTT CAGCACCCTG CGCCAGGCGG GCGGCTTGAG CGGCTACCCC
TGCCGGGCGG AGTCCGAGCA CGACGTGGTG GAGAACTCGC ACGCCTCCAC CTCGCTGAGC
TGGGCCCACG GCATCGCGGT CGCCCACCGG CTGCGGGGCA ACACCACGCC CACGGTCGCG
GTCATCGGTG ACGGTGCGCT CACCGGGGGG ATGGCCTGGG AGGCGCTGAA CAACATCGCG
GCGGACAAGA CCCTGCCGCT GGTGATCGTG GTGAACGACA ACGAGCGGTC CTACGCGCCC
ACCCTCGGGG GCATGGCCGA GCACCTGGCC CACCTGCGGA CCCAGCGCCG GTACGAGCAG
GCCCTGAGCT GGACCAAGAA GAGCGTGCAG AGCGCCCCGG TGGTGGGGCG GCCGGCGTTC
GACGCCCTGC GCGGCTTCAA GAAGGGCGTC AAGGACATGC TGGCGCCGCA GGGCCTGTTC
GAGGACCTCG GCATCAAATA CCTGGGCCCG GTGGACGGTC ACGACCTGGA GGACCTCGAG
AACTCGCTGC GTCTGGCCAA GCGCTTCGGC GGTCCGGTGA TCGTGCACGC CATCACCCAG
AAGGGGCGTG GGTACGACCC CGCGACCAAC GACGAGGCCG ACCGCTTCCA CGCCGTGGGC
AAGATCAACC CGGAGACCGG GCTCCCGCTG GAGATCGCCG GCCGGGCCTG GACCGAGGAG
TTCTCCGAGG AGCTCGTCGA CCTGGCGGGG GAGCGGGAGG ACGTCGTGGC CATCACCGCG
GCGATGCTGA TCCCGGTGGG CCTGGAGCCG ATGCAGCAGG CGTTCCCCGA GCGGGTGTTC
GACGTCGGCA TCGCCGAGCA GCACGCGGTC ACCATGGCGG CCGGCATGTC CTACGCCGGG
CTGCACCCGG TGGTGGCCAT CTACTCCACC TTCCTCAACC GCGCCTTCGA CCAGTTGCTC
ATGGACTGTG CGCTGCATCG GCAGGGGGTG ACCTTCGTGC TCGACCGCGC CGGCATCACT
GGTTCCGACG GGGCCTCGCA CAACGGCATG TGGGACCTGT CGCTGGTGGG CATCGTGCCC
GGGGTGCACC TGGCTGCCCC CCGCGACGGG GTGCGCGTGC GGCAGGCGCT GCGCGACGCC
GTGCAGGTGG ACGACGCGCC CACCGTGCTC CGCTTCCCCA AGGGCTCCGT GCCCGAGCCG
ATCGAGGCGG TCGCACAGCG GGACGGGATC GACGTGCTCA CCGAGGACGG CGACGGTGCC
GTCGACGAGC TGGTGGTCGC GGTGGGGCCC ATGGCGCCGG TGGCCCTGGA GGTCGCTGAG
AAGCTGCGGG CCTCCGGACG GTCGGTCCGG GTGGTGGACC CGGTGTGGAT GCTCCCGTTC
TCCGACGGCC TGCGCAGCGA GATCGAGCGG GCCGGCGGCC GGGTCAGCGT GGTCGAGGAC
AGCCTCGTGG TCGGTGGCCT CGGCAGTCGC GTGGGTGCCG AGTACCCGCA GCGTGAGGTG
CGCACCTTCG GCATCCCGCA GCGCTTCCTG GACCACGCCT CGCGGGGGCA GCTGCTGGCC
GAGCTCGGTC TCAACGCCGA CACCATCGCG GCCGCGTTGC TGGACTCAGC GGACTAG
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| Protein sequence | MSTLDHIGDP SDLRALAADR LPALAQDIRT RLIESVSRTG GHLGPNLGVV ELTIALHRVF
ESPREAIVFD TGHQSYVHKM LTGRTDFSTL RQAGGLSGYP CRAESEHDVV ENSHASTSLS
WAHGIAVAHR LRGNTTPTVA VIGDGALTGG MAWEALNNIA ADKTLPLVIV VNDNERSYAP
TLGGMAEHLA HLRTQRRYEQ ALSWTKKSVQ SAPVVGRPAF DALRGFKKGV KDMLAPQGLF
EDLGIKYLGP VDGHDLEDLE NSLRLAKRFG GPVIVHAITQ KGRGYDPATN DEADRFHAVG
KINPETGLPL EIAGRAWTEE FSEELVDLAG EREDVVAITA AMLIPVGLEP MQQAFPERVF
DVGIAEQHAV TMAAGMSYAG LHPVVAIYST FLNRAFDQLL MDCALHRQGV TFVLDRAGIT
GSDGASHNGM WDLSLVGIVP GVHLAAPRDG VRVRQALRDA VQVDDAPTVL RFPKGSVPEP
IEAVAQRDGI DVLTEDGDGA VDELVVAVGP MAPVALEVAE KLRASGRSVR VVDPVWMLPF
SDGLRSEIER AGGRVSVVED SLVVGGLGSR VGAEYPQREV RTFGIPQRFL DHASRGQLLA
ELGLNADTIA AALLDSAD
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