Gene Ksed_15700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15700 
Symbol 
ID8373076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1608737 
End bp1610260 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content67% 
IMG OID644991838 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_003149350 
Protein GI256825390 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.645755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATG AGTACTTGGC ACGGATCGGG AACCTCATCC GCGACGCGCG ACTGCACCGA 
GGCATGACGC AGACGCAGGT GGCGGACATC CTGAACACCA GCCAGAGCGC CGTGGCGCGG
ATGGAGCAGG GCAAGCAGAA CCTCTCCCTG GAGACGGTGG CGAAGGTCAG CGAGGCGCTG
GACCACGACA TCGTGATCCC CGCCTCCATG CCCCAGCACC TGCGCATCGA GGGCGGACGC
AAGCTGTCCG GATCGATCGA CGTGCGCACC TCCAAGAACG CCGCCGTGGC CCTGCTGTGC
GCCTCGCTGC TCAACCGCGG CACCACCACC CTGCGCAACC TGGCCCGCAT CGAAGAGGTC
AACCGCATCC TCGAGGTGCT GAACTCCATC GGCATCGAGA CCAAGTGGCT GGGCGACAGC
AACGACCTGC GCATCACGCC GCCGGAGACC CTCCGTCTGG AGGACATCGA CGAGGCCGCG
GCCCGCCGCA CCCGCTCGAT CATCATGTTC CTCGGCCCGC TGCTGCACCG CTACCCCGAG
TTCCAGCTCC CCTACGCCGG GGGCTGCGAC CTGGGCACCC GCACCGTCGG CCCGCACCTG
AACTCCCTCA AGCCCTTCGG CCTGGAGGTG CTGGCCACCG ACGGCCAGTA CAACGCGACG
GTCAACAAGA AGGCCCCGGG CCGCCCCATC GTGCTCACCG AGCGGGGCGA CACCGTCACC
GAGAACGCGA TCATGGCCGC CGCGATGGAA CCGACCACCA CGGTGATCCG CAACGCCTCC
AGCAACTACA TGGTCCAGGA CCTGTGCTTC TTCCTGGAGG AGCTGGGGGT GAAGATCGAC
GGCATCGGCA CCACGACCCT CACCATCACC GGTGTGGAGG ACATCAACGC CGACGTGGAG
TACTCCCCCA GCGAGGACCC GATCGAGGCC ATGAGCCTGC TGGCCGCCGC GATCGTGACC
CAGTCGGAGA TCACCATCAA CCGAGCCCCC ATCGAGTTCC TCGAGATCGA GCTGGCGACG
CTCGAGCACA TGGGCATGAA GTACGAGCTA TCCGAGGAGT ACACCTCCAA GAACGGCCGT
ACCCGGCTGG CGGACCTGAC CTACAAGCCC GGCCCCCTGG CCGCGCCGCA GGACAAGGTC
CACTCGATGC CGTACCCGGG CCTGAACATC GACAACCTGC CCTTCTTCGT CATCATCGGC
GCGATGGCCG AGGGCAAGAC CCTGGTGCAC GACTGGGTGT ACGAGAACCG CGCGATCCAC
CTCACCGAGC TCTCCACGCT GGGTGCGCGG GTGCAGCTGC TGGACCCGCA CCGCATCCAG
GTGGAGGGCC CCACCCGCTG GCGCGCCGCG GAGATCATGT GCCCGCCGGC ACTGCGCCCC
GGCGTCGTGA TCCTGCTGGG CATGCTCGCT GCCCCCGGCA CCTCGGTGCT GCGCAACGTC
TACGTGATCA ACCGCGGGTA CGAGGCGCTG GCCGACCGGC TCAACGAGCT CGGCGCCAGC
ATCACGGTGT TCCGCGACAT CTGA
 
Protein sequence
MTDEYLARIG NLIRDARLHR GMTQTQVADI LNTSQSAVAR MEQGKQNLSL ETVAKVSEAL 
DHDIVIPASM PQHLRIEGGR KLSGSIDVRT SKNAAVALLC ASLLNRGTTT LRNLARIEEV
NRILEVLNSI GIETKWLGDS NDLRITPPET LRLEDIDEAA ARRTRSIIMF LGPLLHRYPE
FQLPYAGGCD LGTRTVGPHL NSLKPFGLEV LATDGQYNAT VNKKAPGRPI VLTERGDTVT
ENAIMAAAME PTTTVIRNAS SNYMVQDLCF FLEELGVKID GIGTTTLTIT GVEDINADVE
YSPSEDPIEA MSLLAAAIVT QSEITINRAP IEFLEIELAT LEHMGMKYEL SEEYTSKNGR
TRLADLTYKP GPLAAPQDKV HSMPYPGLNI DNLPFFVIIG AMAEGKTLVH DWVYENRAIH
LTELSTLGAR VQLLDPHRIQ VEGPTRWRAA EIMCPPALRP GVVILLGMLA APGTSVLRNV
YVINRGYEAL ADRLNELGAS ITVFRDI