Gene Ksed_15560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15560 
Symbol 
ID8373062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1592592 
End bp1593665 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content69% 
IMG OID644991824 
Producthypothetical protein 
Protein accessionYP_003149336 
Protein GI256825376 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0115586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGA AGAAGGACGC CAAGAAGAAG CTCGAGAAGG TCGAGAAAGC AGCGAAGGCT 
CAGAAGAAGG AGCTCACGAA GGAGCTCAAG GAGGCCGCGA AGGTCCGTGA GCAGGCCGAG
CGGGAGGCGG CCGGTGCCAT CGAGCCCGGC GCCACGCCCT TCAGCGACGC CCTGCGGGTG
GACACCGGCT TCCGGCTGGA GGAGGTCGAC CCGCGGTCCA CGCCGGCCTT CACGGGCAAC
AAGGTGCAGG GAAAGCTGGC CATGGCCGCC AGCAACGACG AGCTCGACGA GCTGCAGGAG
CGGCTGTGGG CGGCCGGCAC CCGGGGGGAG AAGCGCCGTC TGCTGCTGGT CGTGCAGGGC
ATGGACACCT CCGGCAAGGG CGGCGTCATG CGCCACGTGA TCGGTGCGAT GGACCCGCAG
GGCGTGCAGA TCGCGGCCTT CAAGGCACCC ACGGCGCAGG AGAAGAAGCA CGACTTCCTG
TGGCGCATCC GCAAGGAGCT GCCCGAGCCG GGTCACGTCG GGGTGTTCGA CCGCTCCCAC
TACGAGGACG TGCTGGTGGC GCGCGTGCAC GACCTGGTGC CGCCGGAGAA GTGGAAGGAG
CGCTACAAGC TCATCAACGC CTTCGAGCGC GAGCTGGCCG ACGAGGGCAT CACCATGGTC
AAGGTGATGC TGCACATCTC GCCGCAGGAG CAGTCCGAGC GGCTCATGGA GCGGCTGGAG
CGCCCGGACA AGCACTGGAA GTTCAACCCC GGCGACCTCG ACGAGCGTGA GTACTGGGAC
GACTACCAGG AGGCCTACCA GGTGGCCCTC ACGCGCTGCT CCACCCAGGG CGCCCCGTGG
TTCGTCGTGC CGGCCGACCG CAAGTGGTAC GCCCGCCTGG CGGTGCAGCA GCTGGTGCTG
GAGCACCTGC ACGCGCTGGA CCTCCAGTGG CCCGAGGCGG ACTTCGACGT CGAGGCCAAC
ACCGAGCGCC TGCGCGAGCA GATCGCCGCT CGTGAGCAGG CCGAGGCCGA GGCTGCCGCG
CAGGCGGTCG CGGAGCTCGA GGCCGAGACC GAGACCGAGG CTGCACAGGA CTGA
 
Protein sequence
MGKKKDAKKK LEKVEKAAKA QKKELTKELK EAAKVREQAE REAAGAIEPG ATPFSDALRV 
DTGFRLEEVD PRSTPAFTGN KVQGKLAMAA SNDELDELQE RLWAAGTRGE KRRLLLVVQG
MDTSGKGGVM RHVIGAMDPQ GVQIAAFKAP TAQEKKHDFL WRIRKELPEP GHVGVFDRSH
YEDVLVARVH DLVPPEKWKE RYKLINAFER ELADEGITMV KVMLHISPQE QSERLMERLE
RPDKHWKFNP GDLDEREYWD DYQEAYQVAL TRCSTQGAPW FVVPADRKWY ARLAVQQLVL
EHLHALDLQW PEADFDVEAN TERLREQIAA REQAEAEAAA QAVAELEAET ETEAAQD