Gene Ksed_15340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15340 
Symbol 
ID8373040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1576658 
End bp1577284 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content76% 
IMG OID644991802 
ProductHolliday junction endonuclease RuvC 
Protein accessionYP_003149319 
Protein GI256825359 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0768617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGTCC TCGGCGTCGA CCCCGGGCTG ACGCGCTGCG GCCTGGGTGT CGTCGAGGGC 
CGCCGAGGCG GCAGCCTGCG GATGGTGGCC GTGGACGTGG CGCGGACGTC CGCCGACACC
CTGCCCGAGC AGCGGCTGCT GTCGGTGAGC CGCCGCATCG AGGACTGGAT CGAGACCTAC
GACCCCGATG CGGTGGCCGT CGAGCGGATC TTCGCCCGCT CGGACGTCAG CACGATCATG
GGTACGGTGC AGGCGAGCGG CGTGGCCCTG GTGGCGGCTG CCCGGGCCGG CATCGAGGTG
GGCCAGCACA CCCCCAGTGA GGTGAAGGCC GCGGTCTGCG GCAACGGCCG GGCCGGCAAG
GAGCAGGTGA CCTCCATGGT GGTGCGGATC CTCTCCCTGT CCGCCGCGCC CCGCCCCGCG
GACGCGGCGG ACGCCCTCGC GCTGGCGATC GCCCAGATCT GGCGCGGCGG TGGCGAACGA
CAGCTGGCCG CTGCGGCAGG CACCGGCCGG GGGGAGCCCG ACCGCATGAC CGAGGCCCTC
GCCGCCCAGG CAGCGGCGCG CGAGCGGGCC GCAGCACGGT GGCAGACGGC CCAGGACCAG
GCACGACGGA GCAGGAGGAC ACGGTGA
 
Protein sequence
MRVLGVDPGL TRCGLGVVEG RRGGSLRMVA VDVARTSADT LPEQRLLSVS RRIEDWIETY 
DPDAVAVERI FARSDVSTIM GTVQASGVAL VAAARAGIEV GQHTPSEVKA AVCGNGRAGK
EQVTSMVVRI LSLSAAPRPA DAADALALAI AQIWRGGGER QLAAAAGTGR GEPDRMTEAL
AAQAAARERA AARWQTAQDQ ARRSRRTR