Gene Ksed_15330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15330 
Symbol 
ID8373039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1576032 
End bp1576661 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content74% 
IMG OID644991801 
ProductHolliday junction DNA helicase subunit RuvA 
Protein accessionYP_003149318 
Protein GI256825358 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.436101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCT CGTTGAGCGG AACCATCACC CACGTGGGGC TCGACCACCT CGTGGTCGAG 
GTCGGCGGCG TCGGCATGCG GGTACTGGTG CCCCCGCAGG TGGCCGCCGA GGTGCGTACC
GGGCAGGAGG CCCGGCTCGA GACCTCGCTG GTGGTGCGCG AGGACTCGTT GACCCTGTTC
GGGTTCCTGG ACGCCGACAC GCGCGAGGTG TTCGAGACCG TCCAGTCCGT CTCCGGGGTG
GGGCCGCGCC TGGCCCTGGC GCTGGTCGCC GTGCTCAGTC CTGCCGAGTT GTCCCGGGCC
GTGCACACCG AGGACCTCGC AGCGTTGACG AGCGTGCCCG GCATCGGCAA GAAGGGCGCC
CAGCGGCTGG TGCTGGAGCT GGTGGGCAAG CTGCCCGCGG ACCTCGGTGG CGGCGCCGCA
CCCACGACCA CCGAGCAGTC GGCGGGCGGC GACCCGTCCG AGCCCGCGTG GGCCCCGCAG
GTGCGCGACG CCCTGGAAGG GCTGGGGTGG AACACCGCTC AGGCCACGAA GGCCACGCGG
ACGGTCGTGG AGCAGCACGC CCAGGACACC GGGCCGCCAC CCGAGCTGCC CGTCCTCCTG
CGTGAGGCCC TGCGGGAGGC GGCCTCGTGA
 
Protein sequence
MIASLSGTIT HVGLDHLVVE VGGVGMRVLV PPQVAAEVRT GQEARLETSL VVREDSLTLF 
GFLDADTREV FETVQSVSGV GPRLALALVA VLSPAELSRA VHTEDLAALT SVPGIGKKGA
QRLVLELVGK LPADLGGGAA PTTTEQSAGG DPSEPAWAPQ VRDALEGLGW NTAQATKATR
TVVEQHAQDT GPPPELPVLL REALREAAS