| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_15310 |
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| Symbol | |
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| ID | 8373037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 1572938 |
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| End bp | 1574860 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644991799 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_003149316 |
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| Protein GI | 256825356 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.540675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGC GTGCCCAGCG GGCCAAGGCC GTGAACACCC TGCTGACGCT GCTCCTGCTG
CTGATGCTGC TCTTCGGCGG GCTGGGGGCT GCCCACCTGT TCGCCAAGCC CCAGGCGCAG
TTGACGCCAC TGCTCGGCCT CGACCTCGAG GGTGGACAGC AGCTCATCCT GGAGCCGGCC
ATCGAGGGCG GCGAGGTCAG TGGCGGCCAG GTCGACCAGG CGGTCAACAT CATCCGCCAG
CGCGTCGACG GCTCCGGTGT GGCCGAGGCC GAGGTGACCA CCCTCGGTGG CAGCAACATC
TCGGTGGCCA TGCCCGGCAC CCCGGACCCG GCCGTGCTCG AGTCGCTGCA GGCCTCCAGC
CGCATGACCT TCCGCGAGGT GCTCGCGGTC GAGGGCAGCG CCACCGGCCC GGACACCGTC
GATACCCTGC CCGGGTACGA GCCCTCCGAG GAGCCCTCGG GGGAGGCCAC CCCGGCCGGT
GACGCGACCC CGTCGGGTGA CGCCACGCCC TCGGGTGACG CCTCGGCCGA GCCGAGTTCC
TCGCCGACCA CCGCCGAGGG GGTGTGGCCG GCCCAGGCGA CGCCGTCGGG TGAGCCCACC
TCCTCGCCCA GCCCCTCGGG CTCGGCCTCG CCGTCCGGTG CGAGCAACTC GCCCGAGCCC
AGCGGTTCCG GTTCCGGCGA GTCGCCCGCG CCGTCGCCCT CGGGCTCCGG CGACGGCGGC
GACACCGGCA ACCAGGGGTC CTCTGACCCC GACGCGCGCG GTCAGGACAT CGTCATCCCG
CCGGAGGTCC AGTCCCGCTT CGAGGAGATG GACTGCTCCG ACGAGAAGGC ACAGGACGCC
GCCCAGAAGG CCGGCGACGA CGAGTTCGTC GTGGCCTGCG ACCCGGACGG CCAGGTGAAG
TACCTTCTGG GCCCCACCCG CATCCAGGGC TCGAGCATCG CCGACGCCTC CTCCGGCCCG
GCCACGAACG CCCAGGGCCA GCCGACCGGC GAGATCGCCG TGAACCTGGA GCTCGACGAC
GCCGGGGCCG ACATCTTCGC CGACCTCTCG GCCATGATGG CCGCCCAGCC GGAGGGTTCC
CCGTACAACC AGTTTGCGAT GCTGCTCGAC GGCGACGTCA TCAGTGCGCC CGGCATGCGG
CAGACCATCA CCAACGGCGA GGCCTCGATC ACCGGTAACT TCACCGCCGA GGAGGGCAAG
GCACTGGCGG ACCAGCTGAA GTTCGGAGCG TTGCCGTTCA GCTTCAACCT GCAGTCCTCC
GAGCAGATCA GCCCCACTCT GGGTGAGGAG CAGCTGCGCT GGGGCATCTG GGCCGGTGTG
ATCGGCCTGG TTCTGGTGGC CATCTACTCG CTCTTGCAGT ACCGCGCCCT GGGTCTGGTG
ACCCTGGCCT CGCTCGCGCT GGCGGCGCTG CTGGCCTACG GGGCCGTGGT GCTACTGGGC
TGGCAGTACA ACCTGCGCCT GACCATGGCC GGCATCACCG GTCTGATCGT GGCCATCGGC
ATCACCGCCG ACTCCTTCAT CGTGTACTTC GAGCGCATCC GCGACGAGGT GCGCGAGGGA
CGCCCGCTGC GCAACGCCGT GGACACCGCA TGGGTGCGCG CGCGGCGCAC GATCCTCATC
TCCGATGCGG TGAATCTCCT GGCCGCCGTC ATCCTGTACC TGCTCAGTGA GGCCAACGTG
AAGGCCTTCG CGTTCATGCT GGGTCTGACG ACGATCATCG ACCTGATCGT GGTCATGCTG
TTCACGCACC CGGTGGTCAC GCTGTTGGCC CAGACCAGGT TCTTCGGCAA CGGGCACCCG
CTGTCCGGCA TGAACCCCGA GAGCCTGGGC GCCCGCAAGT CCACCTACGT GGGCCGCGGA
CGGGTGCGCT CGTTGCCCGA ACCGACGCCG ACGTCCGGCA CGACTACGGA GGTCGCCCTC
TGA
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| Protein sequence | MNMRAQRAKA VNTLLTLLLL LMLLFGGLGA AHLFAKPQAQ LTPLLGLDLE GGQQLILEPA
IEGGEVSGGQ VDQAVNIIRQ RVDGSGVAEA EVTTLGGSNI SVAMPGTPDP AVLESLQASS
RMTFREVLAV EGSATGPDTV DTLPGYEPSE EPSGEATPAG DATPSGDATP SGDASAEPSS
SPTTAEGVWP AQATPSGEPT SSPSPSGSAS PSGASNSPEP SGSGSGESPA PSPSGSGDGG
DTGNQGSSDP DARGQDIVIP PEVQSRFEEM DCSDEKAQDA AQKAGDDEFV VACDPDGQVK
YLLGPTRIQG SSIADASSGP ATNAQGQPTG EIAVNLELDD AGADIFADLS AMMAAQPEGS
PYNQFAMLLD GDVISAPGMR QTITNGEASI TGNFTAEEGK ALADQLKFGA LPFSFNLQSS
EQISPTLGEE QLRWGIWAGV IGLVLVAIYS LLQYRALGLV TLASLALAAL LAYGAVVLLG
WQYNLRLTMA GITGLIVAIG ITADSFIVYF ERIRDEVREG RPLRNAVDTA WVRARRTILI
SDAVNLLAAV ILYLLSEANV KAFAFMLGLT TIIDLIVVML FTHPVVTLLA QTRFFGNGHP
LSGMNPESLG ARKSTYVGRG RVRSLPEPTP TSGTTTEVAL
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