Gene Ksed_15000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_15000 
Symbol 
ID8373007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1540486 
End bp1540818 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content68% 
IMG OID644991770 
Productuncharacterized conserved protein (small basic protein) 
Protein accessionYP_003149288 
Protein GI256825328 
COG category[S] Function unknown 
COG ID[COG3856] Uncharacterized conserved protein (small basic protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.0759178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.760857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCA TCGTCGGACT CGTCCTCGGC ATCGTCCTGG GGGTCTGGCT GCAGCCGGAC 
GTGCCCCTGT GGCTCGAGCC GTACCTGCCC ATCGCCGTGA TCGCCGCCCT CGATGCGGTG
TTCGGCGGCG CCCGCGCGGC CCTGGAGGGG ATCTTCTCGG AGAAGGTCTT CGTGGTCTCG
TTCCTCTCCA ACGTGGTGGT CGCCGCGTTC ATCGTGTGGA TCGGTGACCA GCTCGGGGTC
GGCGCCCAGC TGACCACCGG CGTCGTGGTC GTGCTGGGGC TGCGCATCTT CAGCAACGTC
GCCGGGATCC GGAGGCACCT CTTCCATGCC TGA
 
Protein sequence
MIPIVGLVLG IVLGVWLQPD VPLWLEPYLP IAVIAALDAV FGGARAALEG IFSEKVFVVS 
FLSNVVVAAF IVWIGDQLGV GAQLTTGVVV VLGLRIFSNV AGIRRHLFHA