Gene Ksed_14820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14820 
Symbol 
ID8372990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1522845 
End bp1524359 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content74% 
IMG OID644991754 
Productthreonine synthase 
Protein accessionYP_003149272 
Protein GI256825312 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.312507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0904942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTCA CCAGCACCCG CGGCGGGGTG GACCCGCAAG GTGCCGCCCG TGCCATCCTC 
ACCGGCCTGG CCCCGGACGG CGGCCTGTTC GTGCCCGAGC GGATCGCCCC TCTCGAGGTC
GAGGACCTGC TCGACGCAGG CTGGGTGGAC GTGGCCACGG CGGTGATGGA GCCCTACCTG
ACCGGCGACG GGGGGCTCGG TGAGGGTGAC CTGCGGCAGG CGGTCACCAC CGCGGCCGCC
CGCTTCGAGA CCGACGAGGT GGTCCCGGTG GACCTGCTCG GCGAGGGTGC CTCCAGCATC
GGCCTGCTCG CGCTGTTCGG CGGTCCCACC CACGCGTTCA AGGACGTGGC CCTGACCCTG
CTGCCCCACC TGGTGACGCT CGCGCGCCGG GCCGAGGGCG AGGCCGGCAC CACGCTGGTG
CTCACCGCCA CCAGCGGCGA CACGGGCAAG GCGGCCCTGG AGGGTTTCAA GGACGTGCCC
GAGACCGAGG TGGTGGTGCT CTACCCCACC GAGGGCGTGA GCTTCATGCA GAAGCAGCAG
ATGCGCACCC AGGCCGGGGA CAACGTGCAC GTGCTGGGCA TCCACGGGGA CTTCGACGAC
GCCCAGCGCG CCGTCAAGGC CCTCTTCGCC GATGCGGGGG CGCGGGAGCG CCTGGACGCG
CGCGGCTACT CGATCAGCTC GGCCAACTCG ATCAACCTCG GCCGCCTGCT GCCGCAGATG
GTCTACTACG TCACCGGCTA CGCGGCGCTG CGCAGCGCGG GCGTGGTGGC CGCTGGTGAG
CCGGTGGACG TCGTGGTGCC CACCGGCAAC TTCGGGAACC TGCTCGCGGC CACCTGGGCC
CGCGCCGCCG GGGTGCCCCT GGGAGCGCTG GTCTGCGCGA CCAACGAGAA CCGGGTGCTG
GCCGACTTCT TCGCCACCGG CACCTACGAC GCGCGCCGCC GCCTGGTGCG CACCGACTCC
CCGTCCATGG ACATCCTCGT CTCGAGCAAC CTGGAGCGGT ACCTGTACGA GGCCAGTGGC
GGCGACACCG ACCGGGTGCG CACGGCGCTG GAGACCCTCG CCCGTCACCG CCGCTTCGAC
TGGGGGGAGC TCCCGGGCGC CGGGGCGAAC CCGGTACTGG CCGGCACCGC GACCCGCAAG
GAGGCCGCCG ACGCCCTGCG GCGCGTGCAC GCCGAGCACG GCACCCTGGT GGACCCGCAC
ACCGCCGTGG CCCTGCACGT GCTGGAGCAG TACCGCGCCG GTCAGCTCAC CGACGGCACG
GTGCCGCCGG CCCGCCCGGC CCTGGTGGCC GCGACGGCCA GCCCCTACAA GTTCGCCCCC
GCAGTGTTGG GCGCGCTGGG GGGCGAGGCA GACCCGGACG AGTTCGAGAC GCTGCTGCGC
CTGGCCACCC ACGCGGCCGA CGAGCGGGGT GCCCCCGCCG GGCTCGCCGG CCTGCGGGAG
GCCGAGGTGC TCCACGACCG GGTGGTCGAG GTCGACGAGG TGCCCGCCAC CATCGAGGAG
GTCCTGCACC GATGA
 
Protein sequence
MRFTSTRGGV DPQGAARAIL TGLAPDGGLF VPERIAPLEV EDLLDAGWVD VATAVMEPYL 
TGDGGLGEGD LRQAVTTAAA RFETDEVVPV DLLGEGASSI GLLALFGGPT HAFKDVALTL
LPHLVTLARR AEGEAGTTLV LTATSGDTGK AALEGFKDVP ETEVVVLYPT EGVSFMQKQQ
MRTQAGDNVH VLGIHGDFDD AQRAVKALFA DAGARERLDA RGYSISSANS INLGRLLPQM
VYYVTGYAAL RSAGVVAAGE PVDVVVPTGN FGNLLAATWA RAAGVPLGAL VCATNENRVL
ADFFATGTYD ARRRLVRTDS PSMDILVSSN LERYLYEASG GDTDRVRTAL ETLARHRRFD
WGELPGAGAN PVLAGTATRK EAADALRRVH AEHGTLVDPH TAVALHVLEQ YRAGQLTDGT
VPPARPALVA ATASPYKFAP AVLGALGGEA DPDEFETLLR LATHAADERG APAGLAGLRE
AEVLHDRVVE VDEVPATIEE VLHR