Gene Ksed_14600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14600 
Symbol 
ID8372968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1499075 
End bp1499968 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content77% 
IMG OID644991732 
Productcell wall-binding protein 
Protein accessionYP_003149250 
Protein GI256825290 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2247] Putative cell wall-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.221702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.25424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCCA CACCCCTCCA GCACCGCTTC GCCGGCCCGA ACCGCTACGA GACCGCAGTG 
GCCGTCTCCC GCGCCTGCTT CCCCACCAGC CCGACGGTCT TCCTGGCCAC CGGCGAGAAC
TTCCCCGACG CGCTGGCGGC CGGCGCGGTG GCCGGCGCGC TCGGCGCTCC CCTGCTGCTC
ACGCGCGCCC GCCGCCTGCT GGACCCGGTG GCCGCGGAGC TGGTGCGCCT CGCCCCGCGC
GAGGTGGTGG TCGTGGGCTC GGGCACCGCC GTCTCGATGC TGGTCGCCGA CCTCGTCGCA
CACCGCACCG GCGCCGTCGT GCGCCGCATC GGGGGGTCGG ACCGCTACGC AACGGCCGCG
GCGGTGGGTG ACCTGCTCAC CACTCCCCAG CACGAGGTGT TCGTCGTCTC CGGGGAGAAC
TTCCCCGACG CCACCGCGGC AGCGGCTGCC GCCGCACACC GTGGCGCCTC GATGGTGCTG
ACCCGCCACG ACCGCCTGCC CGCCGCGTCC CTGGAGGCCC TGGTGCGGCG CAACCCCGCG
ACGGTCACCG TCGTGGGCGG CACGGACGTC GTCGGCCGGG CCGTGACCGA CGCGATCACG
CGCCAGGTGC GCCCCACCAC CCTGCGCCGC GTGACCGGCT CCAACCGGTA CGCGACCGCA
GCAGCGGTCG CGCGGTACGT CTGGCCCGAC GGCAGCCCCC GGGCGCTGCT GGCGACGGGC
GAGAACTTCC CCGACGCCCT GGCCGCCGGA CCCGCCGCCG CGCTGGTCGG CGCCCCGGTG
CTGCTGACCC GCGCACGCTG GGTGCCCTCG CAGACCACGG CGGCCCTGAC CACCCACGGC
ACACGCGAGA TCGGGCTCGT CGGGGGTGCA GACGTGGCCC GCGCACCCGC CTGA
 
Protein sequence
MPPTPLQHRF AGPNRYETAV AVSRACFPTS PTVFLATGEN FPDALAAGAV AGALGAPLLL 
TRARRLLDPV AAELVRLAPR EVVVVGSGTA VSMLVADLVA HRTGAVVRRI GGSDRYATAA
AVGDLLTTPQ HEVFVVSGEN FPDATAAAAA AAHRGASMVL TRHDRLPAAS LEALVRRNPA
TVTVVGGTDV VGRAVTDAIT RQVRPTTLRR VTGSNRYATA AAVARYVWPD GSPRALLATG
ENFPDALAAG PAAALVGAPV LLTRARWVPS QTTAALTTHG TREIGLVGGA DVARAPA