Gene Ksed_14320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14320 
Symbol 
ID8372940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1480911 
End bp1481633 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content74% 
IMG OID644991706 
Productuncharacterized LmbE-like protein 
Protein accessionYP_003149224 
Protein GI256825264 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.00973186 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.179817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC TCCCTGCCCT CGACTCCTCC GACTTCCAGC GCGTCCTGTG CGTGGTGGCC 
CACCCCGACG ACATGGAGTA CGGCGCCTCG GCGGCGGTCT CGCGGTGGAC GAGCGCCGGC
ATCGAGGTCA CCTACCTGCT GCTCACCCAC GGCGAGGCGG GCATGCCCCA GCCCCCCGAT
GAGGTCGCGC CCGTCCGCGC AGAGGAGCAG CGCCGGGCGT GTGCACAGGT GGGCGTGGAG
GACCTGCGCA TCCTCGACCA CCCCGACGGC GTGCTGGAGC TGACGCTGGG CCTGCGGCGC
GACATCGCGC GGGTGATCCG GGAGGTGCGC CCGCAGGCCG TGATGACCTC CAGCTGGGCC
GACGTCGCGC CGTGGGGGAT CAACCAGGCC GACCACCGGG TGGCGGGGCT GTCCACCGCC
GATGCCGTGG CGGCCGCCGG CAACCGCTGG ATCTTCCCGG AGCTCGTCGA GGCCGAGGGC
CTCGAGCCGT GGAGCACCAC CTGGCTGGTG GTGAACGGCG TGGAGGACCC GACGCACGTG
ATCCAGGTGG GGGAGTCGGA CGTGGCGGCC GCTGTGGCTT CGCTCCGGCA GCACGAGGCC
TACCTCGCGG CGCTGCCCTG GCACCCGAAG CCGGAGGAGT TCATCCCCCA GATCCTGCGC
GATGGGGGAG CAGCCGGCGG CGTGGACGCC GGGCTGCCGG TGCGTGCCCA TCGGGTGGGC
TGA
 
Protein sequence
MTSLPALDSS DFQRVLCVVA HPDDMEYGAS AAVSRWTSAG IEVTYLLLTH GEAGMPQPPD 
EVAPVRAEEQ RRACAQVGVE DLRILDHPDG VLELTLGLRR DIARVIREVR PQAVMTSSWA
DVAPWGINQA DHRVAGLSTA DAVAAAGNRW IFPELVEAEG LEPWSTTWLV VNGVEDPTHV
IQVGESDVAA AVASLRQHEA YLAALPWHPK PEEFIPQILR DGGAAGGVDA GLPVRAHRVG