Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_14320 |
Symbol | |
ID | 8372940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1480911 |
End bp | 1481633 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644991706 |
Product | uncharacterized LmbE-like protein |
Protein accession | YP_003149224 |
Protein GI | 256825264 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.00973186 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.179817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCC TCCCTGCCCT CGACTCCTCC GACTTCCAGC GCGTCCTGTG CGTGGTGGCC CACCCCGACG ACATGGAGTA CGGCGCCTCG GCGGCGGTCT CGCGGTGGAC GAGCGCCGGC ATCGAGGTCA CCTACCTGCT GCTCACCCAC GGCGAGGCGG GCATGCCCCA GCCCCCCGAT GAGGTCGCGC CCGTCCGCGC AGAGGAGCAG CGCCGGGCGT GTGCACAGGT GGGCGTGGAG GACCTGCGCA TCCTCGACCA CCCCGACGGC GTGCTGGAGC TGACGCTGGG CCTGCGGCGC GACATCGCGC GGGTGATCCG GGAGGTGCGC CCGCAGGCCG TGATGACCTC CAGCTGGGCC GACGTCGCGC CGTGGGGGAT CAACCAGGCC GACCACCGGG TGGCGGGGCT GTCCACCGCC GATGCCGTGG CGGCCGCCGG CAACCGCTGG ATCTTCCCGG AGCTCGTCGA GGCCGAGGGC CTCGAGCCGT GGAGCACCAC CTGGCTGGTG GTGAACGGCG TGGAGGACCC GACGCACGTG ATCCAGGTGG GGGAGTCGGA CGTGGCGGCC GCTGTGGCTT CGCTCCGGCA GCACGAGGCC TACCTCGCGG CGCTGCCCTG GCACCCGAAG CCGGAGGAGT TCATCCCCCA GATCCTGCGC GATGGGGGAG CAGCCGGCGG CGTGGACGCC GGGCTGCCGG TGCGTGCCCA TCGGGTGGGC TGA
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Protein sequence | MTSLPALDSS DFQRVLCVVA HPDDMEYGAS AAVSRWTSAG IEVTYLLLTH GEAGMPQPPD EVAPVRAEEQ RRACAQVGVE DLRILDHPDG VLELTLGLRR DIARVIREVR PQAVMTSSWA DVAPWGINQA DHRVAGLSTA DAVAAAGNRW IFPELVEAEG LEPWSTTWLV VNGVEDPTHV IQVGESDVAA AVASLRQHEA YLAALPWHPK PEEFIPQILR DGGAAGGVDA GLPVRAHRVG
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