Gene Ksed_14240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14240 
Symbol 
ID8372932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1471551 
End bp1472609 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content75% 
IMG OID644991698 
Productpredicted membrane protein 
Protein accessionYP_003149216 
Protein GI256825256 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.00629012 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0181744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCCT CCACCGCAGC CGACCACGCC GACCTGCCCC CGGCGCCGCG CGGTGGCGGC 
CGGAGGGTGC TGGGAGCGTT GGGGCGCACG CGGCTGGTCC GCGCCGGGCG TCGCTACCTC
CTGGCGCACG GCAACGTCTA CGCCGGCGGG GTCACGCTCT CGGCGCTGAT CTCCCTGGTG
GCGGCGCTCA CCCTGGCTGT CACCGCCTTC CGGATGGTGC TCGGACGCCG GCCGGAGCTC
TTCGACCGCG TCGTCGATGC GGTGAACGGC ACCTTCCCCG GCCTGCTCGG CGACGGCGAC
GTGCCCGGGG TGCTCACCGC ATCGGACCTC GTGATCGACG GCGGGCTCAC CCTCGCCACG
CTCGTCTCGC TGCCTGTGCT GCTGTGGACC GCGACGAACG CGATGACCTA CCTGCGCATG
TCCGTCCGCG CGATGTTCGG GCTGGCCGCC GCGCCGCTGC ACCCGGTGCG GGCCAAGCTG
TGGGACCTGG TCGGCATCCT GCTGCTCGGC AGCTCGGTGG TGGTGACCGC GATGCTCTCC
AGCGCCGCGA CCTCGGCGGC CCGCTTCGTG TTGGACCACG CCCACATCGA CGCGGGCACC
GACCTGACGC TGCGCATCGC GGCGCTCGCC GCGGCCTTCG TGGTCGATGC GGTGACGATC
GCCCTGCTCT TCCGGGTGGC GGCCAAGGTG CGCACCCCTT GGGCGCAGCG CTGGCGCGGC
GCGGTCCTCG GGGCGCTCGG GTGGGGGGCG CTGCGGGTGG CCGGCACGAG CCTCATCGGG
GCCTGGGACA ACCCGCTGGT CGTCTCCTTC GCGGGACTGG TGACCCTCAT CGTGTGGATC
AACCTGGCGG TCCGCTGGGT GCTGTTCACC GCGGCGTGGA CGGCGGACCC GCCGGCCCCG
CAGTTCGCCC AGGCCGAGGA CGTGCACTCC CGGGAGATCC CGAACTACGT CACGCTGGCG
GCGCCGCACA CGCTGCTGTG GCCGCACCAC CGGGTGACCG GCGCCATCAT CGGCGAGCAG
GAGGCGGCCC CCGGCGCGCC CCGCCGGAAC CGGGGCTGA
 
Protein sequence
MSPSTAADHA DLPPAPRGGG RRVLGALGRT RLVRAGRRYL LAHGNVYAGG VTLSALISLV 
AALTLAVTAF RMVLGRRPEL FDRVVDAVNG TFPGLLGDGD VPGVLTASDL VIDGGLTLAT
LVSLPVLLWT ATNAMTYLRM SVRAMFGLAA APLHPVRAKL WDLVGILLLG SSVVVTAMLS
SAATSAARFV LDHAHIDAGT DLTLRIAALA AAFVVDAVTI ALLFRVAAKV RTPWAQRWRG
AVLGALGWGA LRVAGTSLIG AWDNPLVVSF AGLVTLIVWI NLAVRWVLFT AAWTADPPAP
QFAQAEDVHS REIPNYVTLA APHTLLWPHH RVTGAIIGEQ EAAPGAPRRN RG