Gene Ksed_14190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_14190 
Symbol 
ID8372927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1466478 
End bp1468013 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content78% 
IMG OID644991693 
Productphytoene dehydrogenase-like oxidoreductase 
Protein accessionYP_003149211 
Protein GI256825251 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00208581 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0106814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC GCCACCCCCT CACGCACCGC CGCACCGCCG GAACCCCCCT CCCCGGTCGC 
GCGGTGGCAG GGGGCGCTGG GCACACCGCG GCGGTGGTCG GCTCCGGGCC CAACGGGCTC
GCGGCCGCCG TCGCGCTGGC CCGGGCCGGC CTGGAGGTGA CCGTCCACGA GGCCGCGAGC
TCCCCCGGCG GCGCGCTGCG GTCGGCCCCC GCGCTGGGGC CCGGCACCGT GGTGGACCTC
GGCGCAGGGG TGCACCCCTT CGGGGTCGCG AGCCCGTTCT TCTCCGCCCT CGGTCTGGAG
CGCCACGGGC TTCAGTGGGT GCATCCCGAT CTCCCCCTGG CCCACCCGCT GGAGCAGGGC
CCCGCTGCGC TCCTGCACCG CGACCTGGCC CGCACCGCCG AGGACCTCGG GGTGGACGGG
GCTGCCTGGC GCCGTCTCGT GGGCCCCGCC GTCGCGGACT TCGACCGCAT CGTCCCGGCC
GCCCTCGGTC CGCTGCTGCG CGTCCCGCGG CACCCCGTGG CCCTGGCCCG CTTCGGTCTG
CGCGGGCTCG CCCCGTCCAC CGTCCTGGCC CGGGCGCTCT TCCGGCAGCC GGCCACCCGT
GCCCTGTTTG CTGGGCTGGC CGCACACTCG GTGATGCCCC TGCACCACCC GCTCACCAGC
GTGTTCGGCG TGCTCTTCGG GGCCGCGGGC CACGCCGTGG GGTGGCCGGT GGCCCGCGGC
GGCTCGCAGG CGATCGCCGA CGCGCTGGTC GCGGAGCTGA CGGCCCACGG CGGGCGTGTC
GTCACCTCAT CGCCCGTGAC CGACCTGCGC CAGCTCGCCG ACGCCCACGG CCGGGCCCCC
GCGGTGACGA TGCTGGACAC CACGCCCGCC GCCGCCGTCG CCCTGGCCGG GGACCGCCTG
GCGCCGGCCG TCCGCAGCGG CCTGAGCGCC TGGCGCCACG GTCCCGGGCT GTACAAGGTG
GACTACCTCC TCGACGGCCC GGTGCCGTGG GCCGACCCGC GGGTGAACGG CGCGGGCACC
GTGCACGTGG GCGGCACCCT GGAGGAGCTC GCCACCGCCG AGGGCCTGAC CCACCGCGGG
CAGGACCCCG AGCGCCCCTT CGTCCTGGTG TCCCAGCAGA GCCTGTTCGA TGCCGGGCGC
GCACCCGGCG GGCAGACGGT GCTGTACGCC TACGCGCACC TCGCGCCGGG CACCCGCCAG
GCGGCCGGGC CGCTGGTGGA CGCCCAGATC GAGCGCTTCG CGCCGGGCTT CCGCGACCGC
ATCGTGCGTC GCGTGAACAG CTCCCCGGCC GACCTGCAGG CCCGCAACGC CAACCTGGTG
GGGGGTGACG TCGTGGGCGG CTCCATGGCC GGCACCCAGC TGGTGCTGCG ACCGCGGCCC
ACCCTCTCTC CCTACGACCT GGGGCCGGGG CTGTACCTGT GCTCGGCCTC CGCGCCACCC
GGTGGGGGTG TTCATGGCAT GGCCGGTGCC CACGCCGCGG CCGCCGCGTT GCGCGACCTC
GGTCTGCGGC CCGAACCGCT GGCTCCGCCC CGCTGA
 
Protein sequence
MTQRHPLTHR RTAGTPLPGR AVAGGAGHTA AVVGSGPNGL AAAVALARAG LEVTVHEAAS 
SPGGALRSAP ALGPGTVVDL GAGVHPFGVA SPFFSALGLE RHGLQWVHPD LPLAHPLEQG
PAALLHRDLA RTAEDLGVDG AAWRRLVGPA VADFDRIVPA ALGPLLRVPR HPVALARFGL
RGLAPSTVLA RALFRQPATR ALFAGLAAHS VMPLHHPLTS VFGVLFGAAG HAVGWPVARG
GSQAIADALV AELTAHGGRV VTSSPVTDLR QLADAHGRAP AVTMLDTTPA AAVALAGDRL
APAVRSGLSA WRHGPGLYKV DYLLDGPVPW ADPRVNGAGT VHVGGTLEEL ATAEGLTHRG
QDPERPFVLV SQQSLFDAGR APGGQTVLYA YAHLAPGTRQ AAGPLVDAQI ERFAPGFRDR
IVRRVNSSPA DLQARNANLV GGDVVGGSMA GTQLVLRPRP TLSPYDLGPG LYLCSASAPP
GGGVHGMAGA HAAAAALRDL GLRPEPLAPP R