Gene Ksed_13580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13580 
Symbol 
ID8372866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1409065 
End bp1409874 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content75% 
IMG OID644991633 
ProductrRNA methylase 
Protein accessionYP_003149152 
Protein GI256825192 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCC CGCTGGCCGA CCCGGCCGAC CCCCGCGTGC AGGACTACTT CGGCCTGACC 
GACGTGGCCC TGCGCCGCCG GCTGGAGCCG GAGCGCGGGC TGTACATGGC CGAGTCCGAG
AAGGTGATCC GCCGGGCCCT GGCAGCGGGC CACGTGCCCC GCTCGATGCT GCTCACGCCC
CGGTGGGTGG AGGACCTCGC GGAGCTCGTG GCCGAGGTGG AGGCCACGGG GGCGCCGGTC
TACGTGGCCG AGCCGGCGGT CGTCGAGTCC ATGACCGGAT TCCACCTGCA CCGCGGCGCG
CTGGCGGCCA TGCAACGCCC CGAGCTGCCG GCGGTCGCCG ACCTGCTGGG CGGTGCCCGC
CGGGTGGTCG TGGTCGAGGA CGTGGTCGAC CACACCAACG TGGGTGCCAT CTTCCGGTCC
GTTGCCGCGC TCGGGGCCGA TGCGGTGCTC GTCACCCCCC GCTGCGCGGA CCCGCTCTAC
CGCCGCAGCG TGCGCGTCTC GATGGGGACG GTCTTCCAGG TGCCGTGGAC CCGCATCGAC
CCGTGGCCCG CGGGCATGGC CGAGCTGCAG GGAGCCGGGT TCACGGTCGC GGCCCTCGCA
CTGCGCGACG ACGCGGTGAC CATGCAGCAG CTCGCCGCCG ACCCGCCGGA GCGCCTCGCG
CTGGTGCTGG GCACCGAGGG CGACGGCTTG GCCCCGCAGA CCGTCGAGGG CGCCGACCTC
GCGGTGCGCA TCCCGATGAG CGGGGGAGTG GACTCCCTCA ACGTGGCTGC CGCCAGCGCC
CTGGCGCTGT ACGCCCTGCA GCCGGAGTAG
 
Protein sequence
MPIPLADPAD PRVQDYFGLT DVALRRRLEP ERGLYMAESE KVIRRALAAG HVPRSMLLTP 
RWVEDLAELV AEVEATGAPV YVAEPAVVES MTGFHLHRGA LAAMQRPELP AVADLLGGAR
RVVVVEDVVD HTNVGAIFRS VAALGADAVL VTPRCADPLY RRSVRVSMGT VFQVPWTRID
PWPAGMAELQ GAGFTVAALA LRDDAVTMQQ LAADPPERLA LVLGTEGDGL APQTVEGADL
AVRIPMSGGV DSLNVAAASA LALYALQPE