Gene Ksed_13460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13460 
Symbol 
ID8372854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1395565 
End bp1397163 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content70% 
IMG OID644991621 
ProductATPase component of ABC transporters with duplicated ATPase domain 
Protein accessionYP_003149140 
Protein GI256825180 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.576158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACCG TGTCCGGCCT CGAGCTGCGC GCCGGTCCCC GCCTGCTGCT CGAACCCACG 
TCCTTCCGCG TCGGGGCCGG TGACCGCATC GGCCTGGTGG GGCGCAACGG GGCCGGCAAG
ACGACCATGA CCAAGGTGCT GGCGGGCGAG TCGCTGCCTG CGGCGGGCTC AGTGAGTAGC
TCGGCGCCGG TGGGTTACCT GCCGCAGGAC CCGCGTACGG GGGACCTGCA CGTCACGGGC
CGTGCCCGCA TCCTCTCGGC CCGCGGGTTG GAGGACATCG TGCGCCGCCG GGAGAGGGCC
GAGCAGGAGA TGGCCAGCGA CGAGACTGCG GTGCGCGAGA AGGCGATGCG GCGCTACGAC
CGGGCCAACA CCGAGTTCGA GGCCGCCGGC GGCTACGCCG CCGAGGCCGA GGCCGCCCGC
ATCTCCGGAG CGCTGGGCCT GCCCACCCGC ATCCTGGACC AGGAGCTCGC GACCCTCTCC
GGTGGACAGC GACGCCGCAT CGAGCTCGCC CGCATCCTGT TCTCCGACGC CCAGACGCTG
CTGCTGGACG AGCCGACCAA CCACCTCGAT GCGGACTCCA TCGCCTGGCT GCGCGACCAC
CTGAAGAACT ACACCGGCGG CCTCATCGTC ATCAGCCACG ACGTCGACCT GCTCGATGCG
GTGGTGAACA AGGTGTTCCA CCTGGACGCC AACCGCAGTG CCCTGGACCA GTACTCGCTG
GGATGGAAGG CCTACCTCAA GCAGCGAGAG GTCGACGAAC ACCGCCGCAA GCGCGAGCTG
ACCAACGCCA CCAAGAAGGC CGAGGCCCTG CTCGCCCAGG CCGACAAGAT GAAGGCGAAG
GCCACCAAGG CCACGGCCGC CCAGAACATG GCCCGTCGTG CCGAGCGCCT GCTCTCCGGC
GTGGAGGGGG AGCGGCAGGC CGACCGGGTG GCTGCCCTGC GCTTCCCGAC CCCCGCCCCC
TGCGGCAAGA CGCCGCTGCG GGGACACGGG CTCTCGCGCA GCTACGGCTC ACTGGAGATC
TTCACCGACG TGGACCTGGC GATCGACCGC GGCTCCAAGG TGGTGGTGCT GGGCCTCAAC
GGCGCGGGCA AGACCACGTT GCTGCGCATC CTGGCCGGGG TGGATGCCCC GGACACCGGT
GAGGTCGCTG CGGGCCACGG CCTGCGCATC GGCTACTACG CCCAGGAGCA CGAGAACCTC
GACGTCGGGC GCACCGTGCT GGAGAACATG AAGTCCAGCG CCCCGGATCT CGACGAGACC
GGCGTGCGCA AGGTGCTGGG TTCGTTCCTG TTCAGCGGGG ACGACGTGGA CAAGAAGGCC
GGCGTCCTCT CCGGTGGCGA GAAGACCCGC CTCTCCCTGG CGATGCTGGT GGTCAGCGGC
GCGAACCTGC TGCTGCTCGA CGAGCCCACG AACAACCTCG ACCCCGCCAG TCGGGCGGAG
ATCCTCGATG CCTTGGCGCA CTATGAGGGC GCCGTGGTGC TGGTGAGCCA CGACGAGGGT
GCCGTCGAGG CGCTGGACCC CGAGCGGGTG CTGCTGCTGC CCGACGGCGT CGAGGACCTC
TGGAACGTGA GCTACCTGGA CCTGGTGACC TTGGCCTGA
 
Protein sequence
MITVSGLELR AGPRLLLEPT SFRVGAGDRI GLVGRNGAGK TTMTKVLAGE SLPAAGSVSS 
SAPVGYLPQD PRTGDLHVTG RARILSARGL EDIVRRRERA EQEMASDETA VREKAMRRYD
RANTEFEAAG GYAAEAEAAR ISGALGLPTR ILDQELATLS GGQRRRIELA RILFSDAQTL
LLDEPTNHLD ADSIAWLRDH LKNYTGGLIV ISHDVDLLDA VVNKVFHLDA NRSALDQYSL
GWKAYLKQRE VDEHRRKREL TNATKKAEAL LAQADKMKAK ATKATAAQNM ARRAERLLSG
VEGERQADRV AALRFPTPAP CGKTPLRGHG LSRSYGSLEI FTDVDLAIDR GSKVVVLGLN
GAGKTTLLRI LAGVDAPDTG EVAAGHGLRI GYYAQEHENL DVGRTVLENM KSSAPDLDET
GVRKVLGSFL FSGDDVDKKA GVLSGGEKTR LSLAMLVVSG ANLLLLDEPT NNLDPASRAE
ILDALAHYEG AVVLVSHDEG AVEALDPERV LLLPDGVEDL WNVSYLDLVT LA