Gene Ksed_13430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13430 
Symbol 
ID8372851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1393067 
End bp1394590 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content70% 
IMG OID644991618 
Productnitrate/nitrite transporter 
Protein accessionYP_003149137 
Protein GI256825177 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0010455 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCC TCAGCAAGTC AGGATCGGTG GCCGGGCCCG GTTACAGCCG ATGGCTCATT 
CCCCCCGCCG CCCTTGCGGT CCACCTCTCG ATCGGCCAGG TCTACGCCTT CTCGGTCTTC
AAGTCCTCGC TGGTGGACCA CTTCGAGTCC AGCCAGACCG CCGTGGCGTG GGTGTTCAGC
ATCGCCATCG TGGTGCTGGG GCTCTCGGCC GCCATCTTCG GCACGTGGGT GGAGCGCAAC
GGTCCGCGCC GGGCCATGTT CGTCGCGGCC CTGTGCTGGG CCACCGGCTT CGTCGTCGGG
TCCGCCGGCA TCGCCACCGG GCAGCTCTGG CTGCTGTACT TGGGCTACGG CGTGATCGGC
GGCATCGGTC TGGGCATCGG GTACATCTCC CCGGTCTCCA CCCTCATGAA GTGGTTCCCG
GAGCGGCCGG GGCTGGCCAC CGGCATGGCC ATCATGGGCT TCGGCGGTGG CGCCCTGCTG
GCCTCACCGC TCTCGAACCG GTTGCTGTCC TTCTACGACC CCAGCTACAG CCCCACCACC
GCGGGCTCCT TCGCCGACGG CCGGTCGCTC TCCCTGACCT TCCTCACGCT CGGCGCGGGC
TACCTCGTGC TCATGCTCAT CGGCGTGGCC CTGATGCGGC TTCCGCAGGG TTTCGGTGAC
GACAGCACCG CTGCGCACCG CCCCGGTCAG GGCGGCTCGC TGGTCCGGGC CGGCACGGCC
ATCCGCACCC CCCAGTTCTG GCTGCTGTGG GTGGTCCTGT TCTGCAACGT GACCGCCGGC
ATCGGCATCC TCGAGCAGGC CGCCCCGATG ATCCAGGACT TCTTCCGTGA CAACGGCACC
AGCGCCGTGA CCGCCGCGGC TGCCGGCGGC TTCGTGGGCG TGCTCTCCCT GGCCAACATG
GCCGGTCGTT TCGCCTGGTC GTCACTCTCG GACGCGATCG GCCGCAAGTG GACCTACACC
GGCTACCTCG GCATCGGTCT GGTGGCCTAC GCGGCCCTGG CGCTGGTGGG CAGCAGCTCC
ACAGTGGTCT TCATTCTCTT GGCCGTGGTC ATCATCAGCT TCTACGGCGG CGGCTTCGCC
ACCGTCCCGG CTTACCTCAA GGACCTCTTC GGCACCCTCG AGGTGGGCGC CATCCACGGC
CGCCTGCTCA CCGCCTGGGC CGCCGCCGGT GTGGCCGGCC CGCTGATCAT CAACACGGTG
CTCGATGCGG CGGGGGAGCC CGGCACCATG ACCGCCGGTG ACTACCGGCC GGCCCTGTTC
ACGATGGTGG GAATCCTCAC CGTTGGCCTG GTGGCGAACC TGCTGATCCG CCCGGTGGAC
TCCCGCCACA CTGACGTCGA GGCCGCCCGC ACCGCGCAGG CACACGCCGA CGACCGCGCA
AGGGCCTCCA CCACCGGTGC CCAGACCGGG GCCGCCACCA CCTCCCCGGT CCTCCTCACC
CTGGCCTGGC TCGCGGTGGG TCTGCCGTTG GCCTACGGCC TGTGGTTCAC GGTCGAGCGG
GCCAGCAAGC TCGTGCTCGG CTGA
 
Protein sequence
MAFLSKSGSV AGPGYSRWLI PPAALAVHLS IGQVYAFSVF KSSLVDHFES SQTAVAWVFS 
IAIVVLGLSA AIFGTWVERN GPRRAMFVAA LCWATGFVVG SAGIATGQLW LLYLGYGVIG
GIGLGIGYIS PVSTLMKWFP ERPGLATGMA IMGFGGGALL ASPLSNRLLS FYDPSYSPTT
AGSFADGRSL SLTFLTLGAG YLVLMLIGVA LMRLPQGFGD DSTAAHRPGQ GGSLVRAGTA
IRTPQFWLLW VVLFCNVTAG IGILEQAAPM IQDFFRDNGT SAVTAAAAGG FVGVLSLANM
AGRFAWSSLS DAIGRKWTYT GYLGIGLVAY AALALVGSSS TVVFILLAVV IISFYGGGFA
TVPAYLKDLF GTLEVGAIHG RLLTAWAAAG VAGPLIINTV LDAAGEPGTM TAGDYRPALF
TMVGILTVGL VANLLIRPVD SRHTDVEAAR TAQAHADDRA RASTTGAQTG AATTSPVLLT
LAWLAVGLPL AYGLWFTVER ASKLVLG