Gene Ksed_13410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13410 
Symbol 
ID8372849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1390176 
End bp1391615 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content70% 
IMG OID644991616 
ProductNa+/H+ dicarboxylate symporter 
Protein accessionYP_003149135 
Protein GI256825175 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.02362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCT CCTCCTCGAC CACCACGGTC GAGAGCCGCT CGGCCCAGAC CCCCAGCAAG 
CGCCGCTGGC TGCCGTCCTT CGGGATGCAG ATCCTGCTCG GCCTCGTGGT GGGTGTCGCC
CTCGGCGCCG TCGCCCGGAC CCTCGGTGGC GACGCCGAGA ACCCGAACTG GCTCACCGAG
ACCCTCACCA TCGTCGGCAC CACCTTCATC ACGATGCTGA AGGCGCTGGT CCCGCCGCTG
ATCTTCCTGG CCGTCGTGGC CTCCATCGCC AACCTGCGCG ACCTCGGCAA CGCGGCGCGC
CTCGCGGGCC AGACCCTCAT CTGGTTCGGG ATCACCGCGC TGGTCTCGGT GACCATCGGC
ATCGTTCTCT CCGTGGTCAC CCGTCCGGGG GCGAACACGT CCGTCTCGCC CGATGCGGCG
GCCGCCCCCG ACGGTGGCGG CTCCTGGCTG GACTTCCTCA CCGGGCTGGT GCCCACCAAC
ATCCTGGGCC TCTCCGCCAA GGCGGGTGAG GGCGGCGCGG TGTCGCTGAG CTTCAACGCC
CTTCAGATCG TCGTCATCGC CATCGCGTTC GGTATTGCCG CCATCAAGGT GGGCAAGGAG
GCCGAGCCCT TCCTGGGCTT CAGCCAGTCG GCCCTGGCGA TCGTGCAGAA GATCCTCTGG
TGGGTCATCC TGCTGGCCCC CATCGGCACC GCCGGCCTGA TCGGCCGCGC CGTGGCCACC
TACGGCTGGA CCACCATGGG CAGCCTGGGC ATCTTCGTGC TCACCGTCTA CGCAGGTCTG
GCGCTGGTGC TGTTCGGCCT CTACCCCGCT GTGCTGAAGG CCCACGGGCT CTCGGTGCGG
CAGTGGTTCT CCGGGGCGTG GCCCGCCATC CAGCTGGCCT TCGTCTCCCG CTCCTCCCTG
GGAACGATGC CGCTGACGCA GCGCGTCACC GAGCGAAACC TCGGCGTGCC GTCCGGCTAC
GCGTCGTTCG CCATCCCCTT CGGCGCGACC ACCAAGATGG ACGGCTGCGC GGCGATCTAC
CCGGCCGTCT CGGCGATCTT CGTGGCGCAG TTCTTCGGGC TGGAGCTCGG GATCACCGAC
TACCTGCTGA TCGTGGTGGT CTCGGTGCTG GGCTCGGCCG CCACCGCCGG ACTCACCGGT
GCGCTGGTGA TGCTGACGCT CACCCTGTCG ACCCTGGGCC TGCCGCTGGA GGGTGTCGGT
CTGCTGCTGG CCGTCGACCC CATCCTGGAC ATGGGGCGCA CTGCGGTGAA CGTGGCCGGG
CAGACGCTGG TGCCCACCAT CGTGGCCAAG CGCGAGGGCA TCCTGGACCG CGCCCTCTAC
GAGGCGCCGC GGGGTGAGCT GCCCTACGTG GACGAGAGCG TGACCGAGCA GGCCGAGCAG
GCCCCCGGCG ACGCCGCCGG CATCGAGGAG CCCTCGACCC GGCAGCCCGT CACGACCTGA
 
Protein sequence
MSASSSTTTV ESRSAQTPSK RRWLPSFGMQ ILLGLVVGVA LGAVARTLGG DAENPNWLTE 
TLTIVGTTFI TMLKALVPPL IFLAVVASIA NLRDLGNAAR LAGQTLIWFG ITALVSVTIG
IVLSVVTRPG ANTSVSPDAA AAPDGGGSWL DFLTGLVPTN ILGLSAKAGE GGAVSLSFNA
LQIVVIAIAF GIAAIKVGKE AEPFLGFSQS ALAIVQKILW WVILLAPIGT AGLIGRAVAT
YGWTTMGSLG IFVLTVYAGL ALVLFGLYPA VLKAHGLSVR QWFSGAWPAI QLAFVSRSSL
GTMPLTQRVT ERNLGVPSGY ASFAIPFGAT TKMDGCAAIY PAVSAIFVAQ FFGLELGITD
YLLIVVVSVL GSAATAGLTG ALVMLTLTLS TLGLPLEGVG LLLAVDPILD MGRTAVNVAG
QTLVPTIVAK REGILDRALY EAPRGELPYV DESVTEQAEQ APGDAAGIEE PSTRQPVTT