Gene Ksed_13350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13350 
Symbol 
ID8372843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1385491 
End bp1386780 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content73% 
IMG OID644991610 
ProductIron-regulated ABC transporter permease protein SufD 
Protein accessionYP_003149129 
Protein GI256825169 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGC TCAGCAAGAC CGACGAGAAC ACGCAGGGCG CTCCCGCCGG CCGCCTGGCC 
CCAGCCGCCA CGCACACCGA CCCGGCCGCG CAGCTGGGCA CCCCGGCGAA GGACGAGTCC
CGGGCCAAGC GCCTCCGGTC CGAGGACCCG GCGGACTTCC CCGTGCCCAC CGGGCGCGAG
GAGGAGTGGC GCTTCACGCC GCTGGACCGC CTCGGCTCCC TGTTGACCGA GCGCGCCACG
GACACCGCCG GTGACCACCC GGCCACGACC TGGGACATCA CGGACACCCA GTACGTGGTG
ACCCCGCTGG CTCCCGGCCA GGCGCCCCGC GGCACCGTGC TGGTGCCCGA GGACCGCGCG
GCAGTGGTGG CCTCGGCCGG GTGCGAGGAG GCGCTCCACG TGCAGATCCC GGCGGACACC
GAGCTCGACG AGCCGCTGGT GGTCCGCGTG ACCGGCCACG GCGCTGGTCG CCGCTCGAAC
GCCCACGTGG TGATCGAGGC CGGGACCCAC AGCCGCGCCC TGGTGATCCT GCAGCACACC
GGGTCCGCCG AGCACGGCGA GAACGTCGAG ATCCTGGCCG GCGACGGCTC GCAGCTCACC
GTCGTCTCGC TGCAGGAGTG GCAGGACGAT GCGGTGCACA CCGGCCAGCA CGAGGCCCGC
ATCGGCCGAG ACGCGACCTT CCGCCACATC GTGGTCACCC TCGGTGGTGA CCTGGTGCGC
CTGAACACCA ACGTCTCCTA CGACGGCCCC GGCGGCTCGG CCAACCTCTT CGGCGTGTAC
TTCGCCGATG CGGGGCAGCA CCAGGAGCAC CGCGTGTTCG TCGACCACAA CGCGCCGAAG
TGCCACTCGG ACGTCCTGTA CAAGGGCGCT CTCCAGGGCG AGACGGCCCG GACCGTGTGG
GTGGGTGACG TGCTCATCCG CGCCGAGGCC GAGGGCACCG ACACCTACGA GATGAACCGC
AACCTCGTCC TGACCGACGG GGCGCGGGCC GACTCGGTGC CGAACCTCGA GATCGAGACC
GGCGAGATCG AGGGCGCGGG CCACGCCAGC GCCACCGGCC GCTTCGACGA CGAGCAGCTG
TTCTACCTGA TGGCGCGGGG CATCCCCGAG TCCGAGGCCC GCCGCCTGGT CGTGCGCGGC
TTCTTCGCCG ACATCGTGGG CCGCATCGGC GTGCCCGAGG TCACCGACCG CATCATGCGG
GCGATCGAGG TGGAGCTGGG CTTCGAGCCG GCCGACGCCG AGGAGCTCCA GGCGCTGGAG
GCCGGGTCCG AGCACGAGGC GATCGTCTGA
 
Protein sequence
MSLLSKTDEN TQGAPAGRLA PAATHTDPAA QLGTPAKDES RAKRLRSEDP ADFPVPTGRE 
EEWRFTPLDR LGSLLTERAT DTAGDHPATT WDITDTQYVV TPLAPGQAPR GTVLVPEDRA
AVVASAGCEE ALHVQIPADT ELDEPLVVRV TGHGAGRRSN AHVVIEAGTH SRALVILQHT
GSAEHGENVE ILAGDGSQLT VVSLQEWQDD AVHTGQHEAR IGRDATFRHI VVTLGGDLVR
LNTNVSYDGP GGSANLFGVY FADAGQHQEH RVFVDHNAPK CHSDVLYKGA LQGETARTVW
VGDVLIRAEA EGTDTYEMNR NLVLTDGARA DSVPNLEIET GEIEGAGHAS ATGRFDDEQL
FYLMARGIPE SEARRLVVRG FFADIVGRIG VPEVTDRIMR AIEVELGFEP ADAEELQALE
AGSEHEAIV