| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_13210 |
|---|
| Symbol | |
|---|
| ID | 8372829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 1371085 |
|---|
| End bp | 1373217 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644991598 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_003149117 |
|---|
| Protein GI | 256825157 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAGT CCACCCAGCC CTCCCGCGAC AGCCAGCTCG CGGACCCCAT CATCGAGAAG
GTCGGTTGGA GCGCCACCGA CGTTCGCGCG GTCGACACCG CCCGCGTCCT CGCGGCCGAC
GCGGTGGAGA AGTGCGGCAG CGGGCACCCC GGTACCGCCA TGTCGCTCGC CCCGGTGGCC
TACCTGCTCT ACCAGCAGGT GATGCGCCAC GACCCGAGTG ACCCGGACTG GCTGGGCCGC
GACCGCTTCG TGCTCTCGGC GGGCCACTCG TGCCTCACGC AGTACATCCA GCTGTACTTC
TCCGGCTACG GCCTGGAGAT GGGCGACCTC AAGGCCCTGC GCACCTTCGA GTCCAAGACC
CCCGGCCACC CCGAGGTGCA CCACACCACC GGCGTCGAGG CCACCACCGG CCCGCTCGGC
TCCGGTCTGG CCACCGCGGT GGGCATGGCG ATGGCGCAGC GCCGCCAGCG CGGGATGCTC
GACCCCGACG CGGCCCCCCT GACCTCTCCC TTCGACCACC ACGTGTGGGT CATCGCCTCC
GACGGCGACA TCATGGAGGG CGTGACCTCC GAGGCCTCCT CGCTGGCCGG TCACCAGGAG
CTCGAGAACC TCACGGTGAT CTACGACGAC AACGAGATCT CCATCGAGGA CGACACCGAC
ATCTCGTTCT CGGAGGACGT GGCCAAGCGC TACGAGGCCT ACGGCTGGAA CACCGTGACG
GTCGACTGGC GGGTCAGCGA GCCCTACACC GAGAACGTCG ACGCCCTGTA CGCGGCCCTG
GAGGCCTCGA AGCAGGCCGA CGGCAAGCCG ACCCTCATCA AGCTGCGGAC GATCATCGGC
TGGCCGGCGC CGAACAAGCG CGACACCGGT GCGGCCCACG GCTCGGCGCT GGGCGCCGAC
GAGGTGGCGG CCACCAAGGA GCTGCTCGGC TTCGACCCCG AGGTGCACTT CCCTGAGGAG
GACGAGGTCC TGAACCACGT CCGCAAGGTC GTCGACCGCG GCGCGGCGGC CCACGCCGAG
TGGGACAAGG GCTACCAGGC CTGGCGCGAG GCCAACCCCG AGAACGCCAC GCTGCTGGAC
CGCCTGGTGG CCCAGGAGCT CCCCGAGGGC TTCGCGGAGG CCTTCCCCAC CTGGTCCGCC
GACGACAAGC CGATGGCCAC CCGCAAGGCC TCCGGCCAGG TGCTCAACGC GCTGGCGGAG
ATCATGCCCG AGCTCTGGGG CGGCTCGGCC GACCTCGCCG GCTCGAACAA CACCACGATG
GACAACGTCC CGAGCTTCGT GCCCGAGGGC AAGTCCACGA ACATGTTCTC CGGCAACAAG
TACGGCCGCA CCCTGCACTT CGGCATCCGC GAGAACGCCA TGGGCATGGC ACTGACCGGC
ATGGCGCTGG AGGGCTTGAC CCGCCCCTAC GGCGGCACCT TCCTGACCTT CAGCGACTAC
ATGCGGCCGG CCGTGCGCCT TGCGGCCATC CAGGAGGCCC CGGTCACCTA CGTGTGGACG
CACGACTCCA TCGGCCTGGG TGAGGACGGC CCCACCCACC AGCCGATCGA GCACCTCGCC
GCGCTGCGCG CCATCCCCGA CCTCGATGTG GTGCGGCCGG CCGACGCGAA CGAGACCGCC
GTGGCCTGGC GCACCATCCT GGGCCACGTG GACCACCCGG CGGCGCTGGC GCTGACGCGC
CAGGAGCTCC CCCACATCGA CCGGGAGCAG TTCGCCTCCG CCGAGGGGGT CGCGCAGGGC
GGCTACACGC TCGCCGACGC CGAGGGCGAG CTGAAGGTCC TCATCGTCGC GACCGGCTCC
GAGGTGCAGA TCGCCCTGGA GGCCCGCGAG CAGCTGCAGT CCGAGGGCAT CGGCACCCGA
GTGGTCTCCA TGCCCTGCCG TGAGTGGTTC GCGAAGCAGG ACCAGGCCTA CCGCGACGAG
GTCATCCCCC CGAGCGTCCG CGCCCGCGTC TCGGTCGAGG CGGCCATCGC GATGTCCTGG
TGGGACATCC TCGGCGACGC CGGTCAGGCC GTCTCGCTGG AGCACTTCGG TGCTTCCGCG
CCGTACGAGG TGCTCTACGA GAAGTTCGGC ATCACCCCCG AGGCCACGGT GGCCGCGGCC
AAGAAGTCCC TGAAGATCGT GGAAGGACAG TGA
|
|---|
| Protein sequence | MTESTQPSRD SQLADPIIEK VGWSATDVRA VDTARVLAAD AVEKCGSGHP GTAMSLAPVA
YLLYQQVMRH DPSDPDWLGR DRFVLSAGHS CLTQYIQLYF SGYGLEMGDL KALRTFESKT
PGHPEVHHTT GVEATTGPLG SGLATAVGMA MAQRRQRGML DPDAAPLTSP FDHHVWVIAS
DGDIMEGVTS EASSLAGHQE LENLTVIYDD NEISIEDDTD ISFSEDVAKR YEAYGWNTVT
VDWRVSEPYT ENVDALYAAL EASKQADGKP TLIKLRTIIG WPAPNKRDTG AAHGSALGAD
EVAATKELLG FDPEVHFPEE DEVLNHVRKV VDRGAAAHAE WDKGYQAWRE ANPENATLLD
RLVAQELPEG FAEAFPTWSA DDKPMATRKA SGQVLNALAE IMPELWGGSA DLAGSNNTTM
DNVPSFVPEG KSTNMFSGNK YGRTLHFGIR ENAMGMALTG MALEGLTRPY GGTFLTFSDY
MRPAVRLAAI QEAPVTYVWT HDSIGLGEDG PTHQPIEHLA ALRAIPDLDV VRPADANETA
VAWRTILGHV DHPAALALTR QELPHIDREQ FASAEGVAQG GYTLADAEGE LKVLIVATGS
EVQIALEARE QLQSEGIGTR VVSMPCREWF AKQDQAYRDE VIPPSVRARV SVEAAIAMSW
WDILGDAGQA VSLEHFGASA PYEVLYEKFG ITPEATVAAA KKSLKIVEGQ
|
|---|
| |