Gene Ksed_13200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_13200 
Symbol 
ID8372828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1369919 
End bp1371082 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content71% 
IMG OID644991597 
Producttransaldolase 
Protein accessionYP_003149116 
Protein GI256825156 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00876] transaldolase, mycobacterial type 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.223243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACA CCACCCCCGA GGCCAGCAAG GTCACGACGC TCGACTTCCC GGACGCCCCG 
CAGCCGGTGC GGGACCTCTC CGCCCAGGGT GTCTCCATCT GGCTCGACGA CCTGTCCCGC
CCGATGGTCC GCGAGGGCGA GCTGCAGAAG CTGCTCGACA CCCGCGCGGT GGTCGGCGTG
ACCACCAACC CGTCCATCTT CTCCAAGGCC CTCTCCGAGG CCGCCGACTA CGACGAGCAG
GTGCGCGAGC TCGCCGCCGA GGGCGTGGAC GTCGACGAGG CGGTCTACCG CATCACCACC
ACCGACGTGG CCGAGGCCTG CGACCTGCTG CGCCCGGTGT ACGACCGGAC CGGCGGTCAG
GACGGCCGCG TCTCCATCGA GGTGGACCCG CGCATGGCCG CCGACACCGC CGCGACCGTC
GAGATGGCCG AGCGGCTGTG GGCCACCATC GACCGACCCA ACCTGCTCAT CAAGATCCCG
GCCACCGTCG AGGGTCTGCC CGCCATCACC CAGGTGATCG CCCAGGGCAT CAGCGTGAAC
GTGACGTTGA TCTTCTCCCT GGACCGCTAC CGCGGGGTCA TGAACGCCTA CCTGACCGGT
CTCGAGCAGG CCCGTGAGGC GGGGCGCGAC CTCTCCAGCA TCCACTCGGT GGCGAGCTTC
TTCGTCTCCC GCGTGGACGC CGAGGTGGAC AAGCGCCTGA CGGAGCTCGA CGACCCCCGG
GCCGCCGAGC TCAAGGGCCG GGCCGCGCTG GCGAACGCCC GCCTGGCCTA CCAGGCCTAC
GACGAGGTGT TCTCCACCCC GCGCTGGGCC AACCTGTCCG ATGCGGGGGC GAACGTCCAG
CGTCCGCTCT GGGCCTCCAC CTCGGTGAAG GACGAGTCGC TGCCGGACAC GCTGTACGTG
ACCGAGCTGG TGGCCCCGAA CACCGTCAAC ACGATGCCGG GCGCGACGTT GGAGGCCGTC
GCCGACCACG CGGAGGTCAC CGGCGACACC GTCCAGGGCA CCTACGAGGA GTCCGCCGAG
GTGCTCAACG CCCTCGAGGC GCTGGGCATC CGCTACCAGG AGGTCGTCGA GGTCCTGGAG
CGCGAGGGCG TCGAGAAGTT CACCGACGCG TGGGCGGACC TGCTGGAGTC CGTCACCGAG
CAGCTCGACG CCGCCACGGC CTGA
 
Protein sequence
MTHTTPEASK VTTLDFPDAP QPVRDLSAQG VSIWLDDLSR PMVREGELQK LLDTRAVVGV 
TTNPSIFSKA LSEAADYDEQ VRELAAEGVD VDEAVYRITT TDVAEACDLL RPVYDRTGGQ
DGRVSIEVDP RMAADTAATV EMAERLWATI DRPNLLIKIP ATVEGLPAIT QVIAQGISVN
VTLIFSLDRY RGVMNAYLTG LEQAREAGRD LSSIHSVASF FVSRVDAEVD KRLTELDDPR
AAELKGRAAL ANARLAYQAY DEVFSTPRWA NLSDAGANVQ RPLWASTSVK DESLPDTLYV
TELVAPNTVN TMPGATLEAV ADHAEVTGDT VQGTYEESAE VLNALEALGI RYQEVVEVLE
REGVEKFTDA WADLLESVTE QLDAATA