| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_13010 |
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| Symbol | |
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| ID | 8372809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 1344435 |
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| End bp | 1346246 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644991578 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_003149097 |
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| Protein GI | 256825137 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.639384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCTC CACCCGGTGT CTCCGCCGAG AAGCAACGCC GGCGGGAACA CATCAAGACC
GCCGACAACA TCCCCGAGCC CGACGGCCGC CTGCGCAAGT CCGTCTTCTG GCCCGCCGCC
CTCCTGGCGG TGGGCTTTGT CGCGGTGACG GCCCTGTTCC CTCAGTGGTT CAGCGAGCAG
ATCAGCACCG TGAACAGCTG GGTCGTCAGC TCCTTCGGCT GGTTCTACGT CCTGACCACC
TCCGCCCTGG TGATCTTCTG CATCTGGCTG GGCTTCTCCC GGCTCGGCAA GACCACCCTG
GGCCGTGACG ACGAGGAGCC CGAGTTCGGC CTGGTCTCCT GGTTCGCCAT GCTCTTCGGT
GCCGGCATGG GCATCGGCCT GATGTTCTAC GGCGTGGCCG AGCCGCTCAC GCACTTCGCC
ACCCCGCGCC CCGAGGTCCC CAGCCCGGAG CTCGGCGGCG AGGGCGGAGC CGTGACCCCC
GAGACGGCCG AGGCCGCCCG CCAGGCCATG ACCACGACCT TCCTCCACTG GGGTCTCCAC
CCGTGGGCCG TCTACGCGGT GCTCGGTCTG GGCGTGGCCT ACGCCATCCA CCGCCGCAAC
CGCCCGGTGT CGGTCCGCTA CGCGCTGGAG CCCCTGCTGG GCAACAAGGT CAAGGGTGCT
GCCGGTGACC TCATCGACGT CATCGCCATC ATCGGCACGC TCTTCGGTGT GGCGACCTCC
CTCGGCCTGG GCGTCGCGCA GATCTCCGCG GGCATGGCGC ACCTGGGGAT CATCGACGAC
CCGAACAGCA AGGCCCTGCA GGTCGGCATC ATCGCCGTCA TCACGCTGAT CGCGACGATC
TCGGTCGTCA CCGGTGTGGG CAAGGGCATC CGCTACCTGT CGAACCTCAA CCTCGGCCTG
GCCGTGGTGC TGCTGTTCAC CGTCCTGTTC CTGGGCCCGA CGCTCTTCAT CATGAAGGAC
TTCGTGTTCT CGCTGGGCCA GTACCTGCAG GACTTCTTCC ACCTGTCCTT CCTGACCATG
CCCTTCCAGG GTGATGCCGC CACCGAGTGG CTCGGTGGCT GGACCCTCTT CTACTGGGGC
TGGTGGATCA GCTGGTCGCC CTTCGTGGGC ATCTTCATCG CCCGCATCTC GCGCGGCCGC
ACGGTCTCGG AGTTCCTGGC CGGCGTGCTG CTGGTGCCCG CGCTGCTGAG CTTCTTCTGG
TTCTCCACCC TGGGTGGCAC CGCGCTCTTC CGCGAGATCT TCGGCGGTGG CGGCCTCATC
GGCGAGGGTG GAGCCGTGGA CACCAACACG GCCCTGTTCC AGATGCTGCA GGACCTGCCC
GGAGGCGTGT TCCTCGCGGG TGTCGCGCTG CTGATGGTGG TCGTCTTCTT CGTGACCAGC
TCGGACTCGG GCTCGTTCGT CGTGGACATG CTCGCCTCCG GTGGCTCGCA GGAGCCCCCG
ACCTGGAGCC GCATCTTCTG GGCCGTGGTC GAGGGCAGCA TCGCCGCGAT CCTCATCCTC
GCCACGGCCG ACCCGGCCGC GGCCCTGGGG GCGCTGCAGA CGATGTCGAT CCTCACCGCC
CTGCCGGTGC TGCTGCTGCT CGTGGCCATC GCCTGGGCGC TGGTCCGGGC CCTGTCGGCC
GAGCACCACC GCGAGCGTCG TCTGGAGCAC CAGATGATGC GCGAGGAGAT GCTGCGGGAT
TCCGTGGACG CGACGGTGCA GACCCTCGCC CACGGCGGGG CCCGACCGCG GACCGAGCCC
TCCTTCGTGG GGCGTGGCGG ACCGCGGCGC ACTCCCGCGG CCGAGGACGG TGACGGCGCC
ACCCGCGCCT GA
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| Protein sequence | MNAPPGVSAE KQRRREHIKT ADNIPEPDGR LRKSVFWPAA LLAVGFVAVT ALFPQWFSEQ
ISTVNSWVVS SFGWFYVLTT SALVIFCIWL GFSRLGKTTL GRDDEEPEFG LVSWFAMLFG
AGMGIGLMFY GVAEPLTHFA TPRPEVPSPE LGGEGGAVTP ETAEAARQAM TTTFLHWGLH
PWAVYAVLGL GVAYAIHRRN RPVSVRYALE PLLGNKVKGA AGDLIDVIAI IGTLFGVATS
LGLGVAQISA GMAHLGIIDD PNSKALQVGI IAVITLIATI SVVTGVGKGI RYLSNLNLGL
AVVLLFTVLF LGPTLFIMKD FVFSLGQYLQ DFFHLSFLTM PFQGDAATEW LGGWTLFYWG
WWISWSPFVG IFIARISRGR TVSEFLAGVL LVPALLSFFW FSTLGGTALF REIFGGGGLI
GEGGAVDTNT ALFQMLQDLP GGVFLAGVAL LMVVVFFVTS SDSGSFVVDM LASGGSQEPP
TWSRIFWAVV EGSIAAILIL ATADPAAALG ALQTMSILTA LPVLLLLVAI AWALVRALSA
EHHRERRLEH QMMREEMLRD SVDATVQTLA HGGARPRTEP SFVGRGGPRR TPAAEDGDGA
TRA
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