| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_12890 |
|---|
| Symbol | |
|---|
| ID | 8372797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 1330701 |
|---|
| End bp | 1331957 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644991566 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_003149086 |
|---|
| Protein GI | 256825126 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.132626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0360199 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACC TGTTCACCCC CCAGTTCGGC GAGTTCGGCG GCGCCTACGT GCCCGAGGCG
CTCACGGCCG CGCTCGTGGA GCTCGACGCC GAGCTCACCC GGGCCTTGGT CGACCCCGAG
TTCACCGACC GCCTCAACGG CCTGCACGCC ACCTACACCG GACGTCCCAG CCCGCTGACC
GACGCCCGCC GGCTCTCGGA GCACGCCGGG GGTGCCCGCA TCCTGCTCAA GCGCGAGGAC
CTGAACCACA CCGGATCGCA CAAGATCAAC AACGTCCTGG GCCAGGTGCT GCTCGCCGAG
CGGATGGGCA AGCGCCGTGT GATCGCCGAG ACCGGCGCCG GCCAGCACGG GGTGGCCACC
GCCACCGCCG CGGCGCTGAT GGGCATGGAG TGCACGGTCT ACATGGGGGC CGTGGACACC
CGCCGGCAGG CCCTCAACGT CGCGCGTATG CAGCTGCTGG GTGCGGAGGT GGTGGCCGTC
GAGCACGGCT CGGCCACCCT CAAGGACGCG ATCAATGAGG CCATGCGCGA CTGGGTGGCC
AGTGTCGAGG ACACCCACTA CGTCCTGGGC ACCGTCACCG GACCCCACCC CTTCCCGACG
ATGGTGCGGC GCTTCCACGA GGTGATCGGC ACCGAGGCCC GCGAGCAGGT GCTGGCCGTC
GCCGGCCGGC TGCCCGACGT GGCCGTCGCG TGTGTGGGCG GAGGGTCCAA CGCCATCGGC
CTGTTCTCCG GCTTCCTCGA CGACCCCTCG GTGGAGCTCG TCGGCTGCGA GGCCGGGGGA
GAGGGCATCG AGTCCGGCCG CCACGCGGCC CGCTTCGCCG CCGGGCGCCC CGGGGTGCTG
CACGGCGCCG CGACCTACGT GCTGCAGGAC GAGGGCGGCC AGACGCTCGA GACGCACTCG
GTCAGCGCTG GGCTGGACTA CCCCAGCGTG GGTCCGGAGC ACAGCCACCT CCACGCCACG
GGGCGGGCCC GGTACGTGCC CGTGACCGAT GACGAGGCGA TGGACGCCTT CCGGGTGCTC
TGCCGCACCG AGGGGATCAT CCCCGCCATC GAGTCCGCGC ACGCCGTCGC CGGGGCGATC
ACCGAGGCCC GCCGGCTCGG GCCCGACGGC CTGGTGCTGG TGAACCTGTC CGGCCGCGGC
GACAAGGACG TCGACACCGC AGCCCGGTGG TTCGGGCTGG TGGACGACCA GGGCGAGGCG
CAGCCCGCCG CCGACGAGGA CGCCGACGAC AGCACCGCCC AGGGAGTCGA GTCATGA
|
|---|
| Protein sequence | MTDLFTPQFG EFGGAYVPEA LTAALVELDA ELTRALVDPE FTDRLNGLHA TYTGRPSPLT
DARRLSEHAG GARILLKRED LNHTGSHKIN NVLGQVLLAE RMGKRRVIAE TGAGQHGVAT
ATAAALMGME CTVYMGAVDT RRQALNVARM QLLGAEVVAV EHGSATLKDA INEAMRDWVA
SVEDTHYVLG TVTGPHPFPT MVRRFHEVIG TEAREQVLAV AGRLPDVAVA CVGGGSNAIG
LFSGFLDDPS VELVGCEAGG EGIESGRHAA RFAAGRPGVL HGAATYVLQD EGGQTLETHS
VSAGLDYPSV GPEHSHLHAT GRARYVPVTD DEAMDAFRVL CRTEGIIPAI ESAHAVAGAI
TEARRLGPDG LVLVNLSGRG DKDVDTAARW FGLVDDQGEA QPAADEDADD STAQGVES
|
|---|
| |